| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3921 |
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| Symbol | |
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| ID | 8134908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4415967 |
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| End bp | 4416950 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867228 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003019472 |
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| Protein GI | 253690282 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.441659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATC CCCAGGTAAA ATTTGTTCTG CTGCTGATGC CGGGGTTTTC CCTGCTGTCG
GTCGGCGGGT TTCTTGACAA GCTACGGTTC TCTGGCGATG AGGAGGACTA TAGCCGTCAG
ATGAACTGCT CCTGGACGCT GACTGCGCTG GATAATCAGC CAGTGACAGC CAGCTGTGGG
GCCGTACTCG TACCAGACGA CGCGGTTTCA ACGCGGAAAA TCCATGCTGG AAACTGCGAC
TATTTCGTCA TTTTCGGTGG GAATACACCC GCCAAAGTCA TGTCTGATAC CGCCTCTTAT
CTCCCCTTGC TGCGGCACCT TCGGCGCAGC AAGATCCCGC TTGTGAGTGT CGATAACGCC
GCCTTTCTTC TCGCGAAGAC GGGGTTTTCC GGCAAACGCA TTCTGGTTCA CTGGCGTCAT
TTTGGTGAGT TTAAAGCCCT GTTTCCGTCT ATTACCCCCG TTACGGACAG GAACGTCATG
GAGGAAGGAA ACCTCTATTC TTGCCCCGGC GGCAGCGCCA CCATCGAGCT GGCCGCCTTT
CTGCTGGAAA AAAAACTGGG GAGAGAACGG GCTATCAAGG GGTTGTCAGA TATGTTGGTC
AGTGGGTTTG TGCCGCCGTC CAGCCTGACA TGGAACAGCC CTGAGCTTGA GGGCGCGCCG
ACGTCGGTAC GACGGGCGCT GACTATCATG CGCCAGAGTC TGGCAAGCAG GCTAACTTCT
GAAGAGATTG CCCAGCGCAG CGGCCTGTCG CGGAGACAGC TGGATAGATC GCTGCAAAAG
CGCATTGGCC GTACCATCCA GCAGACGTAC ATGGACATGA AGATCGCTCA GGCCTGTTGG
CTGATGCTGC GGACTTCCCG CACCTTGTCC CAAATTGCGG CAGATACCGG TTTTTCCGAT
CCCAGCCATC TGAGCCGCAT TTTCCGGCAG CATCTGGGGC TGGCGCCCGG AAAGTGGCGT
CGGGAGAATA CATTTGAAAC GTAA
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| Protein sequence | MADPQVKFVL LLMPGFSLLS VGGFLDKLRF SGDEEDYSRQ MNCSWTLTAL DNQPVTASCG
AVLVPDDAVS TRKIHAGNCD YFVIFGGNTP AKVMSDTASY LPLLRHLRRS KIPLVSVDNA
AFLLAKTGFS GKRILVHWRH FGEFKALFPS ITPVTDRNVM EEGNLYSCPG GSATIELAAF
LLEKKLGRER AIKGLSDMLV SGFVPPSSLT WNSPELEGAP TSVRRALTIM RQSLASRLTS
EEIAQRSGLS RRQLDRSLQK RIGRTIQQTY MDMKIAQACW LMLRTSRTLS QIAADTGFSD
PSHLSRIFRQ HLGLAPGKWR RENTFET
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