Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3899 |
Symbol | |
ID | 8134886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4386489 |
End bp | 4386899 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644867206 |
Product | hypothetical protein |
Protein accession | YP_003019450 |
Protein GI | 253690260 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAG GTATGACCTA CCAGATCGCT CTTACGCCCG TGCAGTTCCT GCTTCCCTCT GAAAATGTTG ATATGTCGAA CGTGGAATGT CTGATGGAGG ACATTTGCCG CTGTGGCTGC TGGACGACAC CAGTACCCAT AGAGAAAGAA ACCGGAATTA TCATGGACGG CAATCATCGG CTACGTGCGG CTACCGAGCT GGGATTGAAG CACATCCCCT GCGCGTTGCT TGATTATGAG GATCCTCGCG TGTCCGTTTA TCACTGGAAG ACCGGACAAC CTTTTTGCAA GAATCTGATT ATGCAGACCA TTGTGACGGA AAAGGGTCTG TTTCCCTACA AGACCACACG TCATCTTTTC CAGCCTGCGC TGCCGTCGGT GAGCGTGGTG CTGGATGAAC TGATGCGCTA A
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Protein sequence | MFEGMTYQIA LTPVQFLLPS ENVDMSNVEC LMEDICRCGC WTTPVPIEKE TGIIMDGNHR LRAATELGLK HIPCALLDYE DPRVSVYHWK TGQPFCKNLI MQTIVTEKGL FPYKTTRHLF QPALPSVSVV LDELMR
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