| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3867 |
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| Symbol | |
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| ID | 8134854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4350441 |
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| End bp | 4352051 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644867174 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003019418 |
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| Protein GI | 253690228 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAC GAGCAATACT CCGTACCCTG CTGTTAGGTT CACTCTGCAT GGCCGCTACG
CCGGCCATTC TATCGGCAAA AACCCCTGAC GATCAGCTGA TCGTGGGGAT GAACATGAAC
AACATGCTCT CACTCGATCC GGCCGCCATG ACCGGTAACG AGGTGGTGGG CATTATCGTC
AACCTCTATG ATTCGCTGGT GGTGCTGGAT CCCGCCAACC TGAGTAACAT CCAGCCTTCT
CTGGCGAAAA GCTGGAGCGT CAGTGATGAC GGCAAAGTCA TTACCTTCAA TCTGGTGGAT
AACGCCAAAT TCCACTCCGG TAACCCCGTC ACGGCGCAAG ACTTCGCCTG GTCGATGAAG
CGTCTGCTTA ACCTCAACAT GGCGCAGGCC ACGACGTGGA AATCCTACGG CTTCACCGCG
GAAAACGTGG AGAAAATGAT TCGCGCCAAA GACGGCCACA CCGTTGAAAT TGAACTGCCA
AAACCAAACG ACCCCAAACT GGTGCTCTAC TCGCTGGCGA CGCTGGGCAG CGGCTCAGTG
CTGGACAGCA AAACGGTCAT GAAGCATGAG AAAAACGGCG ACTGGGGCAA CGGCTGGCTG
ACCACGAACG AAGCCGGTTC CGGCCCGTTC AAGCTGGACG TGTGGCAGGC GAAAGACGTG
CTGCGCATCA GCAAAGTTGA GAACAACTGG CAGGGCGACG CTAAAATGCG GCGTGTGATC
TTCCGTCATA TGACCGAATC ACAGGCGCTG CGCCTGATGA TTGAAAAAGG CGACATTGAC
GTGGCCTCTG GTATGTCGGT GCCGGATATC AACGCGCTGA AACAAGATAA AGACGTTGTG
GTTGATGAGG TGAAAAAAGG CACGCTGTAC TACGTTGCCA TGAGCCTGAA AAATGAATAC
TTCGCTAAAC CGAAAGTGCG TGAAGCGGTT CGCTACCTGA TTGATTACGA CGGCGTTAAT
AAAACAGTGA TGCCAGGCTA CGGTTTCTAT CATCAGCGCC CCATCCAGAA AGGGATGGAT
GCGACGTTGC CGGATCCGGG CTACAAGCTT GACGTGCCGC GCGCCAAAGC GCTGCTGGCC
GAAGCGGGCT ACCCAAATGG ATTTGAAACC ACGCTGCGTG TTCTGTCCGA TCAGCCGTTC
CTGAATCTGG CGACATCGGT ACAGTCCACG TTGGCACAGG CGGGCATCAA AGCCAAAATC
ATCTCCGGCA CCGGTAATCA GGTTTACGGC GCGATGCGCG ATCGTAACTT CGATATGCTG
GTTGGCCGCG GCGGTGGCGG CGTCGATCCG CATCCTCACT CCAGTCTGCG TTCTGTTGTC
TATAACCCGG ATAACAGCGA CGAAGCCAAA CTGACCAACT TCCAGGGCTG GCGCACCTCT
TTCTACGACA AACCGCTGAA CGACATGATC GATCAGGCGC TGTTGGAGAA AGATCCTCAG
AAACAGAAGC AGATGTATAT CAACGTACAG AATCGCTATG AAGAACTGTT CCCGGCCATT
ATTCCGGTGT CGCAGATGAT CGATTCCGTG GTGTTGCGTA AGGACGTGAA AGGCTATGTG
CCACATCCGT CTTCTACGAC GCATCTGCGC GAGGTGTATA AGCAGCGCTA G
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| Protein sequence | MKARAILRTL LLGSLCMAAT PAILSAKTPD DQLIVGMNMN NMLSLDPAAM TGNEVVGIIV
NLYDSLVVLD PANLSNIQPS LAKSWSVSDD GKVITFNLVD NAKFHSGNPV TAQDFAWSMK
RLLNLNMAQA TTWKSYGFTA ENVEKMIRAK DGHTVEIELP KPNDPKLVLY SLATLGSGSV
LDSKTVMKHE KNGDWGNGWL TTNEAGSGPF KLDVWQAKDV LRISKVENNW QGDAKMRRVI
FRHMTESQAL RLMIEKGDID VASGMSVPDI NALKQDKDVV VDEVKKGTLY YVAMSLKNEY
FAKPKVREAV RYLIDYDGVN KTVMPGYGFY HQRPIQKGMD ATLPDPGYKL DVPRAKALLA
EAGYPNGFET TLRVLSDQPF LNLATSVQST LAQAGIKAKI ISGTGNQVYG AMRDRNFDML
VGRGGGGVDP HPHSSLRSVV YNPDNSDEAK LTNFQGWRTS FYDKPLNDMI DQALLEKDPQ
KQKQMYINVQ NRYEELFPAI IPVSQMIDSV VLRKDVKGYV PHPSSTTHLR EVYKQR
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