Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3833 |
Symbol | |
ID | 8134820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4314790 |
End bp | 4315179 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644867140 |
Product | sulfur transfer complex subunit TusD |
Protein accession | YP_003019384 |
Protein GI | 253690194 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1553] Uncharacterized conserved protein involved in intracellular sulfur reduction |
TIGRFAM ID | [TIGR03012] sulfur relay protein TusD/DsrE |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.101463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAGTT ACTGTTTGCT GGTAACCGGT CCTGCTTATG GCACACAGCA AGCGAGCAGC GCGTTGCAGT TTGCGCAGGC ACTGTTGGCT GAGGGGCACA GACTGAAAAG TGTGTTCTTC TATCGGGAAG GCGTGTTGAA TGCCAACCAA CTGACGTCAC CTGCTAATGA TGAATTTGAT CTTGTACGCG CCTGGCAACT GTTGGGTGAA ACACATCAGG TGGCGCTGAA TGTCTGTGTT GCCGCCGCGC TGCGCCGAGG CGTGACCGAT GCTCAGCAAG CTGCTCAGCT CAATCTTGCA GGTGCGAATC TGCAACCCGG ATTTGTTCTG AGTGGGCTGG GTGAGTTGGC GCAATCGGTG TTGACCTGCG ATCGGGTTAT TCAGTTTTAA
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Protein sequence | MLSYCLLVTG PAYGTQQASS ALQFAQALLA EGHRLKSVFF YREGVLNANQ LTSPANDEFD LVRAWQLLGE THQVALNVCV AAALRRGVTD AQQAAQLNLA GANLQPGFVL SGLGELAQSV LTCDRVIQF
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