Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3686 |
Symbol | |
ID | 8134666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4160501 |
End bp | 4161115 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644866986 |
Product | arginine exporter protein |
Protein accession | YP_003019237 |
Protein GI | 253690047 |
COG category | [R] General function prediction only |
COG ID | [COG1279] Lysine efflux permease |
TIGRFAM ID | [TIGR00948] L-lysine exporter |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGCTG TTTTTCTACA AGGCGCTCTG TTAGGGGCAG CGATGATTCT GCCACTGGGC CCACAGAATG CATTCGTAAT GAATCAGGGA ATTCGCCGAC AGTACCACCT GATGGTGGCG CTGCTATGTG CATTGAGTGA CATGGTGTTG ATTACCGCCG GTATTTTTGG CGGCAGCGCG CTGCTTAGTC AGTCTTCACT GCTGCTGGGG GCAGTGACCT GGGGCGGCGT TGCGTTTCTG CTCTGGTTCG GCTGGGGAGC GATGAAAACG GCCTTCAGCA AAAATATTGT GCTCGCCAGC GCCGAGGTGA TGAAGCAAAG TCGCTGGCGT ATTATCGCGA CCATGCTGGC GGTGACTTGG CTGAATCCAC ATGTCTATCT GGATACTTTT GTGGTGCTGG GGAGTCTGGG AAGCCAGTTT GCGGGTGATG CCCGAAGCTG GTTTGCACTG GGGACGATGA CGGCTTCTTT CACTTGGTTT TTTGCGCTGG CGCTATTGGC CTCCTGGCTG GCACCGTGGC TGAATACACC GCGGGTACAG CGGGTCATCA ACTTTTTTGT CGGCGTGGTG ATGTGGGGCA TTGCCTTACA GCTGGCACGC CACGGCTGGC AATAA
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Protein sequence | MFAVFLQGAL LGAAMILPLG PQNAFVMNQG IRRQYHLMVA LLCALSDMVL ITAGIFGGSA LLSQSSLLLG AVTWGGVAFL LWFGWGAMKT AFSKNIVLAS AEVMKQSRWR IIATMLAVTW LNPHVYLDTF VVLGSLGSQF AGDARSWFAL GTMTASFTWF FALALLASWL APWLNTPRVQ RVINFFVGVV MWGIALQLAR HGWQ
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