Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3673 |
Symbol | |
ID | 8134653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4145522 |
End bp | 4146409 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644866973 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003019224 |
Protein GI | 253690034 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAAG CCGGTATCAT ACGTGACTTG CTTAACTGGC TGGAAAGCCA TCTCGACCAA CCGCTATCAC TGGATAATGT GGCGGCGAAA GCGGGTTATT CCAAGTGGCA TCTGCAAAGA ATGTTCAAAG ACGTGACAGG CCATGCCATT GGTTCATATA TCCGAGCGCG GAGATTGACC AAAGCGGCGG TTGCACTTTG TCTGACCAGC CGCCCTATCC TTGATATTGC TCTGCAATAC CGTTTTGATT CACAACAGAC TTTTACCCGC GCGTTCAAAA AGCAGTTTAC CCAAACGCCC GCGTCTTATC GTCGTTCCGA TAATTGGAAT ACTTTCGGCA TTCGTCCGCC GATCCGGCTC GGCGCGTTTA CCCTGCCACA ACCGGAATTT GTTACCCTGC CAGAAACACA GCTTCTTGGG CTAACGCAAA CCTATAATTG CCGCCTGGAA CAGATTTGTA ACTTCCGTAC GGAAATTCGC GTTCACTATT GGCGTCAATT TTTAGGTGAA ACCTGCTCCG TTCCCCCTGT GCTTTACGGG CTGCATCATT CACGGCCGAG CAAAGAGAAA GACGACGAAC ACGAAGTGCT CTACACCACC GCGCTGGAGC CACAGTATCT ACCGGATGAT GTCCATACGG GCGAGCCGAT CACGCTACCG GGCGGCGACT ACGCGATGTT TGTCTTTGAA GGGCCGAAAG ACGAGCTACA GGATTTCATT ATCACGCTGT ATGACACCTG TCTGCCGACC TTCCAACTCA CGCGCCGTAA AGGATTTGAT GCCGAACGTT TCCATCCAGA CGGCACAAAG CGTGATGACA TTCCCGCGAT CATCCGCTGC GAGTATTTTA TCCCTATCCA GCACCCAGAG CCGCTCTCAG CGCTGTAA
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Protein sequence | MDQAGIIRDL LNWLESHLDQ PLSLDNVAAK AGYSKWHLQR MFKDVTGHAI GSYIRARRLT KAAVALCLTS RPILDIALQY RFDSQQTFTR AFKKQFTQTP ASYRRSDNWN TFGIRPPIRL GAFTLPQPEF VTLPETQLLG LTQTYNCRLE QICNFRTEIR VHYWRQFLGE TCSVPPVLYG LHHSRPSKEK DDEHEVLYTT ALEPQYLPDD VHTGEPITLP GGDYAMFVFE GPKDELQDFI ITLYDTCLPT FQLTRRKGFD AERFHPDGTK RDDIPAIIRC EYFIPIQHPE PLSAL
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