| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3657 |
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| Symbol | nhaA |
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| ID | 8134637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4125971 |
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| End bp | 4127167 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866957 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | YP_003019208 |
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| Protein GI | 253690018 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.457018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACAA TGATTCGCCG CTTTATTCAG TTGGATGCGG CGGCTGGTGT GATGTTAATG
ATGGCAACGG TGCTGGCGCT CACGTTTGCC AATTGGTCTG TTACTGCCGC TGGCTATCAA
CAGTTCCTGA TGATGCCGGT GGAAATGCGA TTTGGCGCGC TGGAAATCAA TAAGAACCTG
TTGCTGTGGA TTAACGATGG TCTGATGGCG ATTTTCTTTC TGCTGATTGG TTTGGAAGTG
AAACGCGAAT TAGTCGAAGG CTCGTTAGCC AGTCGTCAGC AGGCGATGCT ACCGCTGGCA
GCCGCAGTCG GTGGGATGGT TTTTCCTGCC TTGTTCTTTC TGCTTTTCAA CGCGAACGAT
GAGGTCACAC GCGTTGGCTG GGCGATTCCC GCCGCGACGG ATATCGCATT CGCGATTGGC
GTGCTGACGC TATTGGGCAA GCGCGTTCCC GCAGGGTTAA AAGTCTTCCT GCTGGCGTTG
GCGATCATTG ACGATCTGGG GGCGATCCTG ATCATTGCCC TGTTTTATAC GCAGCAGATC
TTCTGGCCTG CGCTGGGCGG CGCGGTGTTG GCGGTTGCAG CGCTGGCCTA TTTGAATAGG
CAACAGGTCC GGAAAACCTC CGCCTATTTG CTGGTGGGGA TTGTCCTATG GGTCTGCATC
CTAAAATGTG GCGTTCATGC GACGCTGGCC GGGGTGATTG TCGGATTCTT TATTCCTTTG
CGTACGTCCA ACGGTGAACC TTCTCCGGCA GTTACGCTGG AGCATGGTTT ACAAACGTGG
GTCGCGTTTC TGATTATTCC GCTGTTTGCC TTCGCTAACG CAGGCATAGT GTTACAGGGG
ATTGTGCTGG AAAAATTGTT CTCCCCTTTG AGCCTGGGTA TCGCCGCGGG GCTGCTGGTC
GGTAAACCGC TGGGAATTAC CCTGCTCAGT TGGCTAACCA TCCGATTGGG CTATGCCCGT
CTGCCTGCTG GGGTGGGTTT TAGCCAGATA GTGGCGGTGT CAGTGCTGTG TGGTATCGGT
TTTACCATGT CGATATTCAT TACGCTGCTG GCATTCTCTG GCGGCGATGC GGAATTGATT
ACCTATGCCA AGCTGGGAAT CTTGCTGGCG TCGGGGTTGG CGGCGTTGCT CGGCTATCTG
GCATTGCGTG GAGTGTTGCC GGTGCTGGAC AAGGCGGTGC AGCCGTGTAA GGGTTGA
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| Protein sequence | MITMIRRFIQ LDAAAGVMLM MATVLALTFA NWSVTAAGYQ QFLMMPVEMR FGALEINKNL
LLWINDGLMA IFFLLIGLEV KRELVEGSLA SRQQAMLPLA AAVGGMVFPA LFFLLFNAND
EVTRVGWAIP AATDIAFAIG VLTLLGKRVP AGLKVFLLAL AIIDDLGAIL IIALFYTQQI
FWPALGGAVL AVAALAYLNR QQVRKTSAYL LVGIVLWVCI LKCGVHATLA GVIVGFFIPL
RTSNGEPSPA VTLEHGLQTW VAFLIIPLFA FANAGIVLQG IVLEKLFSPL SLGIAAGLLV
GKPLGITLLS WLTIRLGYAR LPAGVGFSQI VAVSVLCGIG FTMSIFITLL AFSGGDAELI
TYAKLGILLA SGLAALLGYL ALRGVLPVLD KAVQPCKG
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