Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3564 |
Symbol | |
ID | 8134544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4016579 |
End bp | 4017772 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644866864 |
Product | beta-lactamase |
Protein accession | YP_003019115 |
Protein GI | 253689925 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAACTC CCGTATTCCC TCTTGATACC GATGCGCCAT CAGCGCATTT CTCCGCCCGA ATTCAGTCTG CCGTCCAGCA GGCATTGGAC GAGCGGCGTT TGGTTGGCGC CGTGGTGTTG GTCGCGCGTA ACGGCGAATT GATTCATCAG CAAGCAGCAG GATGGGCTGA CCGGGAGAAT GCCCGCCCGA TGGCGCTGGA TGCCATCTTC CGGTTTGCCT CTGTCAGTAA GCCCATCGTA TCTGTGGCGG CGATGGTGCT GGTGGCGCAA GGTCGGCTCG ATCTGGATGA AGATATCACC CGCTGGATAC CAACGTTCCA GACCCGACTG CTCGACGGCA GTCCTTCTCG TATTACCGTG CGGCAGTTGC TTAGCCACAC CGCGGGTTTG GGCTACCGCT TTTTCGAACC CCATGCGGAC GGCCCTTACG CACAGGCGGG TGTCTCCGAC GGTATGGATG CTTCCGACAT CAGTTTGAAT GAGAACCTGA GTCGTATCGC CAGCGTCCCC CTGCAATACG TGCCGGGAAC AGCCTGGGGT TATTCGCTGG CAACGGACGT ATTGGGAGCT TTGATCGAAC GCGTTCAGGG CTCGCCATTG GATGAGGCTG TGCGCCAACT GGTGACCGAA CCGCTGGGCA TGCACGATAC GGGCTTCACT GTACGTGATC CATTGCGCCT GACGACGGCC TACGTGAACG ACACTCCACA GCCACATCGC CTGATTGAAG GCGAAACGGT TTCTCCTTTC GAGGGGGCCA TCGGCATCGC GTATAGCCCC GCTCGTATCT GTAATGCACA GGCCTTTCCA TCCGGTGGAG CAGGTATGGC AGGGACGGCT TGGGATCTGC TGCGCCTGCT GGAAGCCCTG CGTAAAGGGG GAGGCGTGCT GCTGCCTGAG GCGTTGATCG AGGAGATGGG GCGCGATCAA ACACAAGGGC TGGAACTGCC CAATGCACTG GGCTGCGGTT TTGGCCTCGG TTTCTCGGTC CTGCGCGATC CGCAGTTAGC CGAGTCACCA GAGTCGTCAG GCACCTGGCG CTGGGGGGGA GCTTACGGTC ATTCATGGTT TGTCGACCGA CAACAAGGTT TGAGCGTGGT GGCTTTCACC AACACGATGT ACGAGGGGAT GTCGGGGCGT TTTGTTACCG ATCTGCGTGA TGCCGTGTAT AGCTCGTTGG AGGCAATACG ATGA
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Protein sequence | MITPVFPLDT DAPSAHFSAR IQSAVQQALD ERRLVGAVVL VARNGELIHQ QAAGWADREN ARPMALDAIF RFASVSKPIV SVAAMVLVAQ GRLDLDEDIT RWIPTFQTRL LDGSPSRITV RQLLSHTAGL GYRFFEPHAD GPYAQAGVSD GMDASDISLN ENLSRIASVP LQYVPGTAWG YSLATDVLGA LIERVQGSPL DEAVRQLVTE PLGMHDTGFT VRDPLRLTTA YVNDTPQPHR LIEGETVSPF EGAIGIAYSP ARICNAQAFP SGGAGMAGTA WDLLRLLEAL RKGGGVLLPE ALIEEMGRDQ TQGLELPNAL GCGFGLGFSV LRDPQLAESP ESSGTWRWGG AYGHSWFVDR QQGLSVVAFT NTMYEGMSGR FVTDLRDAVY SSLEAIR
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