| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3536 |
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| Symbol | |
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| ID | 8134516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3983112 |
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| End bp | 3984440 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866837 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_003019088 |
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| Protein GI | 253689898 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAACG TGCAGCAATC AGCAGAACAG GTCTTAGTGG TCGCTGATGA CTTTACGGGT
GCCAATGATG CGGGCGTCGG TCTGGCGCAG CATGGCGCAC GGGTTAGCGT CGTCTTTGAC
GTTAATAAAC TGCACGCGGA CTTACTGGGT GATGCGGTGG TGATCAATAC CGATAGCCGT
GCGGCGCGTG ACGACGTGGC GTCTCAACGT ACTGCAGAAG CGGTTGCAGC CTGGCAGGCA
GCAGGCGGAC AAGGCTGGAT TATCAAGAAG ATTGACTCGA CGTTGCGTGG AAATCTGGGC
GCGGAAATTG CCGCTGCGCT GTCTGCGGCA GAGGTGCCCG TCGCGCTGAT TGCCGCTGCG
TCGCCGATGC TGGGACGCGT GACCTGCAAA GGCGAAGTCT GGGTGAACGG GCGTTTGCTT
ACCGATACGG AGTTTGCCAG CGATCCCAAA ACGCCGGTGA CCTCGGCTTC TATCGCTGCT
CGTCTGGCGG AGCAAACCGC GTTACCGATG GCGGAAATAC ACCTTGATGA CGTCCGTCAG
GCCAATTTAG CTCACCGTTT GCAGCAGTTG GCGGACGAGG GCGTACGTCT GATTATTCTT
GATACGGATG TGCAGGACGA TCTGGAGAAG ATCGTAGATG CCGCCAGCGC ATTACCGTTT
CGTCCTTTGC TGGTCGGTTC GGCAGGCCTG AGCGAAGCGC TGGCGAATGC GCAGGATTTT
ACGCGCAAAA CGGCGAAGCC GTTGCTGGCT ATCGTCGGGT CAATGAGTGA TATCGCTCAA
AAACAGATTA CGGCCGCCAA ACTGCTCAGC AATGTCACGC TGGTTGAGAT CGATATCAAC
GCGCTCTTTT CACCCCATTC ATCCACCGTC ATGGCATCTC AGTGTGAGGA GGCGGTGACG
GCGCTGCTGA ACGGCCACCA TTGCATTATT CGTACCTGTC ACAACGAAAA TCAGCGCTTC
GAAATCGACG CGCGGTGCCA GCAGCTTGGG CTTAGCCGAC AGCAGCTTGG CGAAACGATC
AGCCACTATC TGGGGGAACT TACGCGCAAC CTTGTTCAGG CGCTAGACAG CCTGACAGCG
GACGGTACTC ACCAGCGCGA GCTGGGAGGA CTGTATTTAT CCGGTGGTGA CATTGCGATT
GCCGTGGCAA CCGCACTGGG TGCTACCGGC TTTCAGATTA AGGGGCAAAT CGCATCCTGT
GTGCCCTGGG GATACCTGCT GAACAGCGTT GTCGGCACGA CCCCTGTGAT GACTAAAGCG
GGGGGTTTTG GCAACGAAAC TACTTTGCTC GACGTTTTAC GTTTTATTGA GGAGAAGGTC
AGTGAGTAA
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| Protein sequence | MSNVQQSAEQ VLVVADDFTG ANDAGVGLAQ HGARVSVVFD VNKLHADLLG DAVVINTDSR
AARDDVASQR TAEAVAAWQA AGGQGWIIKK IDSTLRGNLG AEIAAALSAA EVPVALIAAA
SPMLGRVTCK GEVWVNGRLL TDTEFASDPK TPVTSASIAA RLAEQTALPM AEIHLDDVRQ
ANLAHRLQQL ADEGVRLIIL DTDVQDDLEK IVDAASALPF RPLLVGSAGL SEALANAQDF
TRKTAKPLLA IVGSMSDIAQ KQITAAKLLS NVTLVEIDIN ALFSPHSSTV MASQCEEAVT
ALLNGHHCII RTCHNENQRF EIDARCQQLG LSRQQLGETI SHYLGELTRN LVQALDSLTA
DGTHQRELGG LYLSGGDIAI AVATALGATG FQIKGQIASC VPWGYLLNSV VGTTPVMTKA
GGFGNETTLL DVLRFIEEKV SE
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