| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3487 |
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| Symbol | |
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| ID | 8134467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3932898 |
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| End bp | 3933821 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644866788 |
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| Product | DNA-binding transcriptional regulator LysR |
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| Protein accession | YP_003019039 |
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| Protein GI | 253689849 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.711753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCAA TATCCTTACG ACACATTGAG ATTTTCCATG CGGTCATGAC GACTGGGAAT
CTGACGGAAG CGGCGGCTCT GCTGAATACC TCGCAGCCGA CCGTCAGCCG CGAACTGGCA
CGCTTCGAGA AACTGATTCA GATGACGCTG TTCGAGCGAC TGCGCGGCAG GCTTTACCCC
ACCGCACAGG GACTACAGCT GTTTGAAGAA GTGCAGCGTT CTTATTATGG ATTGGATCGG
ATTATCAACG CCGCCAGCGA TATTCGCCGT TTTCAGCAAG CGCAACTTTC CGTTGCCTGT
CTGCCCGTGT TTTCACAGTC GCTGCTGCCA GACGTCTGCA AACCGCTGCT GGCGCGCTAT
CCACGGCTTA ATCTGCACAT CATTCCGCAG GAATCACCGC TGCTGGAAGA GTGGCTGTCC
GCCCAGCGCC ACGATTTAGG CTTAACGGAA AACAGCCTCA CGCCAGCCGG TACAGAACGG
CAAACGCTGA TGTTACTCAA TGAGGTGTGC GTGCTACCAG CCGGACATCC GCTGGCGCAA
AAAGCGGTGC TCACACCGCA GGATTTTGCC GATGAGCCCT TTATCAGCCT GTCGAGTGCC
GACAGCTATC GCCAACTGCT GGACAAACTG TTTCAGGAAC AGGGCGTGTC GCGTCGAATG
GTACTGGAAA CCCACAGCGC AGCGTCGGTA TGTGCGATGG TACGGGCGGG TGTCGGGCTG
TCCATCGTCA ACCCGCTTAC CGCGTTGGAT TATGCCGCCT CCGGCGTGAT CGTGCGGCCT
TTCAGCATTG ATGTGCCCTT TACGGTCAGC CTGATTCGCC CACTGCACCG TCCTGCGTCG
GCGCTGGTCG ATACTGTAAT TGACCAACTC AGGCAGTACG CCGCTGGCGT GCCTTCACGT
CTGGAGCGGG TCTTGCGGCA GTAA
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| Protein sequence | MAAISLRHIE IFHAVMTTGN LTEAAALLNT SQPTVSRELA RFEKLIQMTL FERLRGRLYP
TAQGLQLFEE VQRSYYGLDR IINAASDIRR FQQAQLSVAC LPVFSQSLLP DVCKPLLARY
PRLNLHIIPQ ESPLLEEWLS AQRHDLGLTE NSLTPAGTER QTLMLLNEVC VLPAGHPLAQ
KAVLTPQDFA DEPFISLSSA DSYRQLLDKL FQEQGVSRRM VLETHSAASV CAMVRAGVGL
SIVNPLTALD YAASGVIVRP FSIDVPFTVS LIRPLHRPAS ALVDTVIDQL RQYAAGVPSR
LERVLRQ
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