Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3464 |
Symbol | |
ID | 8134444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3908857 |
End bp | 3910512 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644866765 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_003019016 |
Protein GI | 253689826 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAACT ACAAAATAGG TACCCGACTG GCCGGCGGCT TTGGCCTGCT TATTGCGCTT TCGCTGGCCA TGCTGACCAG CGGCATTTAT CAACTTAACC AGGTATCCAG CAGTACGAAA CAGATGATGC AAGAACCGCT GCGCAAGGAG CGGCTGGCAT CGGACTGGCA TGCTACGCTC GTCGCTGGCG TCCAGCGCAG TATGGCGGTT GCCCGCAGCA ATGACGATTC GCTGGTTGAG CTATTTGCGG CGGAAAACAC CCGCGCCAGT AAAGAAAGCG GTAAACGACA GGAACAATTT GCCAGCCTGA TTTCCACCCC CGAAGAAAAA GCGTTATTCG ACAAAGTCGG CGAATACCGC CAGTCCTACA TCAAAAAGCG CGACGCGATT ATCGCGGAAA AAGGCGCGGG TAACTTCGAT CGCGCCAGAT CGCTCTTCGA CAACGAGTTC GTTCCGGCTT CCAACGGCTA TTTGGCCAGC GTGGAAGCGC TGCGCGACCA TCAGCGCGCC AGCATCGACC AGATGGGGCA AGACATCAAC ACTGGCGCCA GCCGTGGCGA TCTCATCCTC GCCGTCACGG GCGCGCTAAG TGCCATCATC GGCGTCCTGA TCGCCTGGGT GCTCACACGC AGTATCGTGC AACCGCTCGC GCGGGCAGTA CGTGCGACAC AGGCCGTCGC AGCGGGCGAT CTGACGCATA ACGTGCAGCC GGAAGGACGC GATGAAGCCG CCCAACTGCT GCATGCCCTG CAAGACATGA CGGTGCGTCT GCGCACTATT GTTGGCGAAG TTCGTCAGGG TTCCGAATCG ATTGCCGGCG CGTCTTCACA ACTTGCCGCA GGCAACATCG ACCTGTCCAG CCGCACGGAA GAGCAAGCCA GTGCGCTACA GGAAACCGCC GCCTCCATTG AGCAGTTAAG TTCGACGGTC AGACAGAACG CCGATAATGC CCGTCAGGCC AACCAACTGG CACAATCGAC TACACAGCAA GCGCAATCGG GTGGACAGTT GGTGACGGAA GTGGTGGAAA CGATGGGCGC GATCGATTCC TCATCGAAGA AGATCGTCGA TATCATCGGC GTTATCGACA GCATCGCGTT CCAGACCAAC ATTCTGGCGC TGAATGCCGC CGTAGAAGCT GCGCGGGCGG GAGAACAGGG TCGCGGTTTC GCCGTGGTCG CCAGTGAAGT ACGCAGTCTG GCACAACGTA GCGCCTCTGC CGCTAAAGAG ATCAAAGAGC TGATCGACCG TTCCGTTCAG ACCGTGGAAG CGGGCAACCG GCTGGTAGTA CAGGCGGGCG CGTCGATACA GGATATCGTC AACGGCGTGC GTAAGGTCAG CGATTTGGTT GGCGAAATTA GCTCTGCCAG CAATGAGCAG ACGATGGGGA TTGAGCAGGT GAACGTTGCA GTTAACCAGA TGGAAGTGAC GACTCAGCAA AATGCGTCGC TGGTGAATGA AGCGTCAGCC GCCACGCAGT CTCTGCAACA GCAGGCCGCA CAGCTGGCGG AGACGGTCAG CCAGTTCCGT CTGGGCAACA GCCATCAGAT CGCCCGTACG CCAGCGGCAG CGCCTTCGTT AGCCCTGCAA CCCGCGCTGG CCGCGCCGGG TAAGAACGTG GCCACAGCCG GTGAAGGTGA CTGGACATCG TTCTGA
|
Protein sequence | MKNYKIGTRL AGGFGLLIAL SLAMLTSGIY QLNQVSSSTK QMMQEPLRKE RLASDWHATL VAGVQRSMAV ARSNDDSLVE LFAAENTRAS KESGKRQEQF ASLISTPEEK ALFDKVGEYR QSYIKKRDAI IAEKGAGNFD RARSLFDNEF VPASNGYLAS VEALRDHQRA SIDQMGQDIN TGASRGDLIL AVTGALSAII GVLIAWVLTR SIVQPLARAV RATQAVAAGD LTHNVQPEGR DEAAQLLHAL QDMTVRLRTI VGEVRQGSES IAGASSQLAA GNIDLSSRTE EQASALQETA ASIEQLSSTV RQNADNARQA NQLAQSTTQQ AQSGGQLVTE VVETMGAIDS SSKKIVDIIG VIDSIAFQTN ILALNAAVEA ARAGEQGRGF AVVASEVRSL AQRSASAAKE IKELIDRSVQ TVEAGNRLVV QAGASIQDIV NGVRKVSDLV GEISSASNEQ TMGIEQVNVA VNQMEVTTQQ NASLVNEASA ATQSLQQQAA QLAETVSQFR LGNSHQIART PAAAPSLALQ PALAAPGKNV ATAGEGDWTS F
|
| |