Gene PC1_3301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3301 
Symbol 
ID8134274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3720100 
End bp3720645 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content53% 
IMG OID644866595 
ProductAcireductone dioxygenase ARD 
Protein accessionYP_003018853 
Protein GI253689663 
COG category[S] Function unknown 
COG ID[COG1791] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGAT TAACCATTTT TAGCGACAGC GATGCAAGCC AGCCGATTTG GCAAAGTCAG 
GATGCCGAGG CGATTCAGAA ACAACTGAAC GAAATCGGTG TACGTTTTGA ACGCTGGGAA 
GCCAGCCAGA AGCTGAGCGA TGCGCCGTCG TCGGAGGAAG TGCTGGCGGC CTATCAGCAT 
GAAATCGATA AGTTGGTGGC AGAAAAAGGC TATCAGAGCT GGGACGTCAT CAGCATGCGT 
TCTGATAACC CACAGCGTGC GGAATTGCGC ACCAAGTTTT TATCCGAGCA TGTGCATCAC 
GAAGACGAAG TGCGCTTTTT CGTCGAAGGC GCGGGGCTGT TCTGCCTGCA CCTGAACGGC 
AAGATTTACC AGATTCTGTG TGAGAAGAAC GATCTGCTGT CCGTACCGGC AGGCACGGCA 
CACTGGTTTG ATATGGGGCC GGAACCGCAC TTCACCGCCA TCCGCCTGTT CGATAACCCG 
GAAGGTTGGA TCGCGCATTT TACTGGCGAT AAGATCGCGG ATGCGTATCC GAAATTGGTG 
CGATAG
 
Protein sequence
MSGLTIFSDS DASQPIWQSQ DAEAIQKQLN EIGVRFERWE ASQKLSDAPS SEEVLAAYQH 
EIDKLVAEKG YQSWDVISMR SDNPQRAELR TKFLSEHVHH EDEVRFFVEG AGLFCLHLNG 
KIYQILCEKN DLLSVPAGTA HWFDMGPEPH FTAIRLFDNP EGWIAHFTGD KIADAYPKLV 
R