Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3043 |
Symbol | |
ID | 8133998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3428076 |
End bp | 3429236 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644866326 |
Product | putative 3-phenylpropionic acid transporter |
Protein accession | YP_003018602 |
Protein GI | 253689412 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00902] phenyl proprionate permease family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0906108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTTGC AATCGACGCG CTGGCTGGCG CTGAGCTATT TCACTTACTT TTTTTGTTAT GGCGTTTTCC TGCCGTTTTG GGGCGGGTGG CTGAAAGGCG AGGGGCTGTC CGCCGAGTCG ATCGGGATGC TGCTGGGGGC GGGTCTGGTG GCGCGCTTCG TCGGTAGTTT GGTCATCACG CCCAGTGTGA AAGATCCGTC CAAACTGATT ACGGTATTAC GTGGACTGGC GTTACTGTCA CTGGCGCTGG TCGTTGGTTT TTGGCTGGGT AATGCCTGGC TGTGGCTGAT GATAGTGATG ATTGGGTTTA ACCTGTTTTT CGCGCCGCTG GTGCCGCTGA CCGATGCATT AGCGGCGACC TGGCAGCGGC AGGTCGTGAT GGATTACGGC AAGGTGCGGG TTTGGGGGTC GATAGCCTTC GTTATCGCCT CTGCGGCGAC GGGGGAACTG GTCGCTATCT GGGGACATCC CGCGATTCTG GCGATTCTCA GTGCGGGGCT TGCTGTCATG CTGTTAGGCA TGCTGCTTCG CCCCAGCGTG ATGCCGCAAG CCGCAGCGTC GACGACACAG TCTGTTAGCG TGACGCCGTG GAAAACCTTG CTGACTGAGC CTGCGGTATG GCGTTTCCTG CTTTGTGTAT CCCTGCTACA GGGCGCGCAC GCGGCTTACT ATGGTTTCAG CGTTATTTAT TGGCAAGACT CAGGCTATTC CGCCTCAATT ATCGGCTATC TCTGGTCATT AGGTGTGGTC GCGGAAATTG TCATCTTTAC CTTCAGCCAG CGTCTGTTTC GGCGCTGGAG CGCCAGACAG CTTCTGCTGC TCTCAGCCGT GTGTGGCGTG GTGCGCTGGG GGCTAATGGG CTCGACGGTG GCTCTGCCGT GGCTGATTGT GATACAGATA TTGCACTGTG GCACGTTCAC CGTGTGCCAC CTGGCCGCGA TGCGTTTTAT CGCGGCACGT TCTGGTGGTG ACATTCTGCG GCTACAGGCG GTGTATTCCG CGCTGGCGAT GGGGGGCAGT ATCGCAGTGA TGACGATGGT ATCCGGTTTC CTGTTTGAGC ATTTGCAGGG CGGCACGTTC TGGGTGATGG CGCTGTTGGC GGTGCCGGCA CTGTTTATCC GGCCTTCTGT CAGCCACCGT GCTGCGGTCG AAAAGGTCTA A
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Protein sequence | MVLQSTRWLA LSYFTYFFCY GVFLPFWGGW LKGEGLSAES IGMLLGAGLV ARFVGSLVIT PSVKDPSKLI TVLRGLALLS LALVVGFWLG NAWLWLMIVM IGFNLFFAPL VPLTDALAAT WQRQVVMDYG KVRVWGSIAF VIASAATGEL VAIWGHPAIL AILSAGLAVM LLGMLLRPSV MPQAAASTTQ SVSVTPWKTL LTEPAVWRFL LCVSLLQGAH AAYYGFSVIY WQDSGYSASI IGYLWSLGVV AEIVIFTFSQ RLFRRWSARQ LLLLSAVCGV VRWGLMGSTV ALPWLIVIQI LHCGTFTVCH LAAMRFIAAR SGGDILRLQA VYSALAMGGS IAVMTMVSGF LFEHLQGGTF WVMALLAVPA LFIRPSVSHR AAVEKV
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