| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2959 |
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| Symbol | |
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| ID | 8133914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3338769 |
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| End bp | 3340073 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866242 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003018518 |
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| Protein GI | 253689328 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0805194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGTCA ACGCCAGCGG CCTTGCGCCA CAAGAGAGAG GACGTCGCCA TGCCAGAACA
GCGCTATTGC TGGCGCTCGT CCCCGGCCTT GGGCAGATTT ATAACCGCCA GATCGTCAAA
GGCGCGTTTT TCTTTATCGC CATGGTCTGC TTTATCAGCG TATTCCATGA TTTCCTGCGG
GACGGCACGT GGGGGCTGAT TACGCTGGGC ACCGAGCTGC CGCGCGATCA CTCTATTTTT
CTGCTGGCAA AAGGCATTAT CAGTCTGATC GTCGCCGCCT TCGGCATCGG CGTTTACTAT
TGCAGCCTGC GCGATGCCTA TGTGTGCGGC ACCAGACGTG ATAAAGGCCT GCCGCTAAAC
AGCGTGAAGA AGCAATATCA GATGCTGCTG AGCGAAGGCT TCCCTTATCT GATGATCACG
CCCGGCTTTA TCCTGCTGGT ATTTGTCGTG GTGTTCCCGA TTATTTTCGG TTTCTCCATC
GCCTTTACCA ATTACGACCT TTACCACACG CCGCCTGCCA AGCTGGTCGA CTGGGTCGGA
ATGAAGAACT TTATCAACAT CTTCCGGCTC GATCTCTGGC GCTCAACGTT CTTTGACGTT
CTGCAATGGA CGGTCATTTG GACGCTGATT GCGACCACGC TCCAGTGTGC CGTGGGCATA
CTGCTGGCAA TTCTGGTGAA CCAAAAAGGA CTGCGTTTCA AACCGCTAAT CCGCACCATC
CTGATCCTGC CGTGGGCAGT ACCGGGTTTC GTCACCATTC TGGTCTTCGC GGGGATGTTT
AACGAAACGT TTGGCGTGAT TAACAACGGC ATTCTGGCCG CGCTCGGGAT TGAGCCTAAG
GCGTGGATGA CCGATCCGTT CTGGACCAAA ACCGCGCTGA TTCTGATGCA AACGTGGTTA
GGCTTCCCGT TTGTGTTCGC CATGACGACT GGCGTATTAC AGGCTATTCC TGACGACTTG
TACGAAGCCG CGACGATTGA CGGAGCCAGC AGTTGGTACA AGCTGACCAC TATTACGCTG
CCGCTGGTGC TCTACTCCAT TGCGCCGATC ATCATCACGC AGTACACGTT CAACTTTAAT
AATTTCAACA TCATCTATCT GTTCAACAAC GGGGGACCGG CGGTCATCGG TTCCAACGCA
GGCGGGACGG ATATTCTGGT GTCCTGGATT TATAAGCTGA CCATGTCTTC TTCCCAATAT
GCGATCGCGG CCAGCATTAC CATTCTGCTG TCGATCTTTG TCGTGGGAAT CGCGCTGTGG
CAGTTCCGCG CCACCAATTC CTTTAAACAA GACAACATGG CCTAG
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| Protein sequence | MTVNASGLAP QERGRRHART ALLLALVPGL GQIYNRQIVK GAFFFIAMVC FISVFHDFLR
DGTWGLITLG TELPRDHSIF LLAKGIISLI VAAFGIGVYY CSLRDAYVCG TRRDKGLPLN
SVKKQYQMLL SEGFPYLMIT PGFILLVFVV VFPIIFGFSI AFTNYDLYHT PPAKLVDWVG
MKNFINIFRL DLWRSTFFDV LQWTVIWTLI ATTLQCAVGI LLAILVNQKG LRFKPLIRTI
LILPWAVPGF VTILVFAGMF NETFGVINNG ILAALGIEPK AWMTDPFWTK TALILMQTWL
GFPFVFAMTT GVLQAIPDDL YEAATIDGAS SWYKLTTITL PLVLYSIAPI IITQYTFNFN
NFNIIYLFNN GGPAVIGSNA GGTDILVSWI YKLTMSSSQY AIAASITILL SIFVVGIALW
QFRATNSFKQ DNMA
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