Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2874 |
Symbol | |
ID | 8133829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3250738 |
End bp | 3252405 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644866161 |
Product | hypothetical protein |
Protein accession | YP_003018437 |
Protein GI | 253689247 |
COG category | [S] Function unknown |
COG ID | [COG4938] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTGA TTAAGCTTGT TTTAACTAAT TTTAGGTCTT TCAAAGAAAC TCAAGTTATA CAATTTGCTC CTGTGACATT GCTCTTTGGG CCTAACAGTG TTGGTAAAAC GACCATTTTA ATGGCTCTTT TTTATTTGCA ACAAATTTTA GAAAAAGGAC AATGCAATCC AATTCAAATT GAATCTATGG GTGACAAAAA AATAGGCGGC TTTAAGTCAT TAGTACATGG GGGGGATCTG AATAAAGAAA TCGGAATTGG TGTCGAATTT TTATCCGGAA CAACTATAGG GAAAGAGTAT AGTGAATATA TTGAGAAATT TGCTGACTTA AGTGGATTTG ATATATTAAG AATTAATGAT TTATCTGTTG AAGCAAAAAA AATAAAGTTG GATTTTATTA TTTCATGGTC ATTTAGCAAG CAGACGGCTT ATGTAAGGCA GTATAAAGTA ACTATCAATG ATGAATATTT CGGAACAATG CTTTGCAATG AAGATATTGA CCATTCTATT ATATCAGATA TAAATTTTTG TCACACATTA ATTAATGATA ATGAGAACTC AGAGTATGAA AATAACAACG AGTACAAGAA TAAGTTTCAT GAAAAATATA ATGAATTAGT TGGAGGAGGG GGGGTTAATT TTCTATATAA AAAATCCAAT GAAGCGATAA CCGAGTTTAA CTCTGAAAAA ATTAATATGA GCAGGCCGGT TTTCTTTAAA GGATATGCAG GTGGATTACC TATTCTTGGT GAATTAATTC AAGTAGGCTT TGGCTTGGAA TCTACCAATT CCATTGATGA AATACTTGAC CATGATATTG TTATTCGAGC GTTGACTCAA ATTTTCATTT CTCCATTAGA TAAATTTAGA ATTCTCCTTA AGGATAGCAT AGCTATAGGC CCGGTAAGAG TTGTTCCAGA ATCCTCTTAC AAAATGAATC CTTATCCCGA ACAGAAAAAT TGGTTCAATG GTTCAGCTGC GTGGGATATT TTATATAAAT TCGACGATAA CAAAAATGAT AAATTGATTG ACAAGGTCAA TTATTGGTTT AGTGAACAAG AAAAATTGAA TACAGGTTAT AAAATCATTA GACCTATTCA CCTTACAGAA ATTATTCGAA AAAATATACT AGGTGCAACC GAAGATTCAG CTTCCTGTTT CCATGAACCA GATCACTATG CTTTTTTTGA AAGAGATAGT GAGCCGCAAG TTTTATTTAT GGATATAAAA AATGACTTAA AACTTTACCC CAGTCAGGTA GGTATTGGAC TTAGCCAAAT TCTTCCTATT ATTGTTGCAG CACATTTCGT TACGAAAGGC TTTATAGCAA TCGAACAACC AGAACTTCAC ATACACCCTG CATTCCAAGT TGTAATTGGT GATTTATTTA TCCAATCAAA TGAGTTTAAA TCAACTAATC CAATGTTTAT TGTTGAAACT CATAGTGAAC ATATAATACT CAGGATATTA AAAAGAATTA GGCAAACGAC AGAGAAAAAA ATCTCTCAAA CTGGAAGGCA TGTGACACCC GAAGATATCT CTATCATTTA TTTACAGTCT ACTTCTGAAG GTATTATAGC GAAAAAACAA AATATAACTG AAGACGGTGA TTTCGAAGAA GATTGGCCAA ATGGTTTCTT TGATGAAAGA GATGAGGAGT TATTCTAA
|
Protein sequence | MKLIKLVLTN FRSFKETQVI QFAPVTLLFG PNSVGKTTIL MALFYLQQIL EKGQCNPIQI ESMGDKKIGG FKSLVHGGDL NKEIGIGVEF LSGTTIGKEY SEYIEKFADL SGFDILRIND LSVEAKKIKL DFIISWSFSK QTAYVRQYKV TINDEYFGTM LCNEDIDHSI ISDINFCHTL INDNENSEYE NNNEYKNKFH EKYNELVGGG GVNFLYKKSN EAITEFNSEK INMSRPVFFK GYAGGLPILG ELIQVGFGLE STNSIDEILD HDIVIRALTQ IFISPLDKFR ILLKDSIAIG PVRVVPESSY KMNPYPEQKN WFNGSAAWDI LYKFDDNKND KLIDKVNYWF SEQEKLNTGY KIIRPIHLTE IIRKNILGAT EDSASCFHEP DHYAFFERDS EPQVLFMDIK NDLKLYPSQV GIGLSQILPI IVAAHFVTKG FIAIEQPELH IHPAFQVVIG DLFIQSNEFK STNPMFIVET HSEHIILRIL KRIRQTTEKK ISQTGRHVTP EDISIIYLQS TSEGIIAKKQ NITEDGDFEE DWPNGFFDER DEELF
|
| |