| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2869 |
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| Symbol | |
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| ID | 8133823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3244755 |
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| End bp | 3247202 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644866157 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003018434 |
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| Protein GI | 253689244 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.266209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTC TTTCATCCGC ATTCTTGCGC GTTTGCCTGC TGGCGATGTT GATGCTGCCT
GTTGGATATG CATTGGCGGC GAGTGCGGAT CCTGATCCAC AGCCTGCGCA GACCGATGCG
CCAGTAAAAA TTAATGTTGA TGCCGAGTTG GTCAAGCTGC AAAAACAGTT AGATAACATC
AAGCAGCAGG TCTCAGGCAC CAATAACGAC AGCAAATTTG GCGCGTTGAA TGACACCACG
CAGGAACTGG CGAATAACGC CAGCGAGCTT GCCAATACCG TAGCGCCGCA GCGCGCTCAA
ATTCAGGCTC AGTTGGATGT TTTGGGGCCA GCACCAGAAC CCGGCTCCAG CATTACTGAA
ACCAGTGAGG TGACGCGTAA GCGAAACAGT TTGAATGCGC AGAAAGCAAA AATGGATGCG
CAGAGCGAGC AGATTCAGGC GTTACGCACC AGCGCGGCCA ACTTATCAGC GCAAATTGTC
ACTCTGCGTC GTAATGCGCT GAAAACGCAG CTTGCATTGA ATTCCGGTAG CATTCTGGGC
GGGCGTTTCT GGGCACCCGT TGTGACTCCG CAGGCCGAAG ATGTCCGTCG CCTGAGTGCC
TTTCAGGAGC AGTTAAGCGA TGCCTTTACT GTAGCCTGGG AGCCTGACTG GCGTTACGGT
TCTGCCTTCC TGATTGTGAT CGCCATGGTG ATGAGTTCGA CAGGGCGCCG GTATCTGGAG
AAATATCTGG CCTGGGCGGG AATTCACTGG CTGCCAGAAG GGCGTCTGCG GCGGAGTTTT
TTAGCTACGG CGTCGGTTAT CTCGACCGTG GTCACGATCG GTATCGCAGT GAATCTGATC
GACTTTACGT TTACGCGCCA CGGCGAGGCT TCAGAGCGCG TCGTGTCGTT CCTTGATGCG
TTGGTGAGGC AGGCCATTTT CTGTTCGATG GTGGCCGGAT TAGGACGTGC GTTCCTTTCA
AATCAGCGCC CTTCGTGGCG TTTGCCTGCG ATTGCTAACC CCGTCGCTAA AGCGATGAAG
CCGTTCCCCG TGGTGGCGGC TGGCATTATT CTGATCTTCG GTTTTATTGA ACAAGTGACG
GCGACGGTGG GGACATCGGT CGCTGCAACC ATTATGGTGA ACGGCTTATC TGCGCTGTTC
CTTGCGCTCA CCGCCGGAAC GATAACGCTG AAAAGCGATC AGATTCGTCG GCAGATGGTG
CATTCAGGCG AACAGCCAGA AGCGCGTTCG ACGTTATCCG GTGTTATTCA TCTTGCGGTA
TTGGCGACGG CGTTCTCGAT TCTGGTGTCG CTGGTCATCG GCTATATCTC ATTGGCTCGT
TTTTTGGCGT TCGAGCTGGT GTGGATTGGC ATGGTGTTCT CCTGCCTGTA TCTGTTCTCA
ACATTCATTA CTGATATCTG CGAAAGCCTC TTTTCCCCCA ACAATGCCAG CGGCAAGCGG
ATGAAAAATT CGCTCAATCT GGACGATCGC CATCTGGCTC AGGCCGCCTT GATCTTGTCA
GCCAGCGGTA AAGTCATTTT AATTTTAATG GCGGCGGTCG CCTTACTTAA CGGTACGTTT
GGCACCACGA CGCCTTTGGA ACTCGTGCAA AAAGCCGTTG AGATCTGGGG CGGGAAAGGG
CTGGAAACCT TAAGCATTGT GCCTGCTCAT CTGGTCAATG CCGTGCTCTT TCTTGTCGTG
GGGGTCTATG TTCTACGCTC CTCAAAACGC TGGCTGGAAG ATGAGTTCCT TCCTAAAACG
ACGTTAGAGC GCGGAATCCG TGCGTCACTG GTAACGCTGT TCAGCAACAT CGGCTATATC
CTGATTATCC TGTTGACGCT GGCGACACTG GGGATTCAAT GGAACAAGCT GGCGTGGATT
GTCAGTGCGT TGTCGGTAGG TATTGGTTTT GGTTTACAGG AGATAGTGAA GAACTTTATC
TCCGGCCTGA TTTTGTTGAC GGAGCGTCCG GTGAAAGTAG GGGACTCGGT CAGCATCAGT
GGGGTTGAAG GGGATATCCG GCGGATTAAT GTGCGTGCGA CGGAAATTCA GTTGGGTGAC
CGTTCGACGG TGATCGTGCC GAACTCTCAA TTTATCTCAC AGAATGTGCG CAATATTACG
ATGGGGAACC CGTTTGGGGT TGCTACGCTG GCGCTGACGT TCCCGCTAGA TATCGACCCT
GAAGAAGTCC GGGCACTGCT ACTGGATGCG TATATCAACC ACGATTCGAT TCTGGAATCA
CCGGCACCGT CAGTGAAGTT CAGTCAACTC ACCCCGACGG GCATGGTGCT GAGCGTAACA
GGCTATGTCA GCAGCCCGAG AATGGTATCG GAAGCAAAGA GCGATCTGTT GTTTGAGATC
ATCAAGCGGT TACGGTCATC TAATATTCCG CTGGCCGTAC CGCAGAAGAT GGTGTTGGAA
AACTCAGGGC TTGCGCTGAC TGACGGCACT TCGGGTGAGG ATAAATAA
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| Protein sequence | MNILSSAFLR VCLLAMLMLP VGYALAASAD PDPQPAQTDA PVKINVDAEL VKLQKQLDNI
KQQVSGTNND SKFGALNDTT QELANNASEL ANTVAPQRAQ IQAQLDVLGP APEPGSSITE
TSEVTRKRNS LNAQKAKMDA QSEQIQALRT SAANLSAQIV TLRRNALKTQ LALNSGSILG
GRFWAPVVTP QAEDVRRLSA FQEQLSDAFT VAWEPDWRYG SAFLIVIAMV MSSTGRRYLE
KYLAWAGIHW LPEGRLRRSF LATASVISTV VTIGIAVNLI DFTFTRHGEA SERVVSFLDA
LVRQAIFCSM VAGLGRAFLS NQRPSWRLPA IANPVAKAMK PFPVVAAGII LIFGFIEQVT
ATVGTSVAAT IMVNGLSALF LALTAGTITL KSDQIRRQMV HSGEQPEARS TLSGVIHLAV
LATAFSILVS LVIGYISLAR FLAFELVWIG MVFSCLYLFS TFITDICESL FSPNNASGKR
MKNSLNLDDR HLAQAALILS ASGKVILILM AAVALLNGTF GTTTPLELVQ KAVEIWGGKG
LETLSIVPAH LVNAVLFLVV GVYVLRSSKR WLEDEFLPKT TLERGIRASL VTLFSNIGYI
LIILLTLATL GIQWNKLAWI VSALSVGIGF GLQEIVKNFI SGLILLTERP VKVGDSVSIS
GVEGDIRRIN VRATEIQLGD RSTVIVPNSQ FISQNVRNIT MGNPFGVATL ALTFPLDIDP
EEVRALLLDA YINHDSILES PAPSVKFSQL TPTGMVLSVT GYVSSPRMVS EAKSDLLFEI
IKRLRSSNIP LAVPQKMVLE NSGLALTDGT SGEDK
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