| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2863 |
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| Symbol | |
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| ID | 8133817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3238018 |
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| End bp | 3239586 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644866151 |
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| Product | Pectate lyase/Amb allergen |
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| Protein accession | YP_003018428 |
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| Protein GI | 253689238 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.707547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAGAG CGGTTATTGG GACTGGTCGT TTACGTACCT GTGCGGTAGC TATTGCCTTT
TCTGGGCTCG TGCTTTCCGG GTGTGATAAT AGTCAGAAAC CACTGGAAGA AGCGGCTCCG
CCAGATTTGC AGGTGAAAAC GGCACCGTTT GGCTGGGCTG CGCAATATCA GAATACGGAT
GGTAAGTTTT ATGCAACGAC GGGGGGCGAA GGCGCACATG AAAATAGCAT TTATGTCGTG
ACCAGCCGCC AGGAATTAAA AGATGCGTTA AATAATATAC GCAGTCCCCT TTATATCGCA
GGCGATGCCG ATGCGGAGTT GAAGGCAAAG TTAGAGCCTA AAATTATCTA TTGGCAAGGC
ACTATCCGCG GCGACGATTT AGGTAATGGG CGCTATGCGG ATGCTGAGTA TTATAAAACC
AAGCCGAATA AAACAACGTT CGATTTTGAT TTATATGTCA AAGCGTTCGA TCAGGACTAT
ATGGCGCAGT TGAAAGCGAC GGCGGATGCG GGTGGCAGCG ATGCGGCGGC GGCTAGTGCG
GAACTGAGCC TGCTTAAGAA ACAAAATGGT CAACGTTCGC AGTATGCCAA CAACCAGAAG
GCGCAGATTC AATTTCAGGT ACCGCCGAAT ACCTCGATTT TAGGCGTAGG TAGCGAAGCG
AAGCTGGTGG AAGGTTATTT ATCCCTCAAC ACCCTAAGTC ATACGTTTGG CAAAACTGAT
AACAGCAACA TCATTATCCG TAATATTACC TTTCAGGCGC CGCGCGACTT TGCCCCAGCA
TGGGATGCCA GCGACGGCGA TAAAGGGAAC TGGAATGCCC GTTATGATGC CGTCTCGATT
AATGCCAGCA AAAATGTTTG GGTTGATCAC TGCACCTTTA CAGATGGTGA ACATCCTGAC
TATCAGGAAC CGGTGTTATT TGGCAAACAT ATCCAACGCC ATGATGGCCT GCTGGATATA
GAAGACGCTG CCGATTATCT GACGATTTCT TACAACATTT TCGCTCAGCA TGACAAAACG
GTATTAATTG GCTCCGGTGA CGGTGATAAA GGGGAATATC GAATCACTTT TGAAGGGAAT
TTATGGGACA ACAGCGTGCA GCGTTCGCCG CGAGTGCGCT TTGGTCAGGT GCATTTGCTC
AATAATTACC ATCGCGGGGC AACGGACACG AATTACCCCA TTCTGTATGC CGTTGGGATG
GGATTCGACT CCTCCATTCT TTCCGAAAGT AACGTGTTTA ATTTCCAGGG CGGGGGAGCG
GATGAAAAGT TGATTATCGG CGCCTACAAG GGAAGCAAAT TTAAAGACAA CGGCTCCTGG
TTCAATGGCA ATCCGGCAAG CAATTTGAAT CAAATCGCAT TAGACAAATG CAGCGCATTG
CAAGAGACCG AGAAGGCCGC TGCCGCAAAC TCAGGGAAAG CGGTACCCGC ATGGGCGCTG
GAGACCTGCA CCAATGAATT GGAATGGAGC CCGCCTTATG CGTACAGCGC AGGGAAATCC
CTCGCCGTCG TTGAGAAATA TGTTCTGGAA AATGCCGGTG CGGGAAAACT GGAGATTGCC
CTGCCGTAG
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| Protein sequence | MFRAVIGTGR LRTCAVAIAF SGLVLSGCDN SQKPLEEAAP PDLQVKTAPF GWAAQYQNTD
GKFYATTGGE GAHENSIYVV TSRQELKDAL NNIRSPLYIA GDADAELKAK LEPKIIYWQG
TIRGDDLGNG RYADAEYYKT KPNKTTFDFD LYVKAFDQDY MAQLKATADA GGSDAAAASA
ELSLLKKQNG QRSQYANNQK AQIQFQVPPN TSILGVGSEA KLVEGYLSLN TLSHTFGKTD
NSNIIIRNIT FQAPRDFAPA WDASDGDKGN WNARYDAVSI NASKNVWVDH CTFTDGEHPD
YQEPVLFGKH IQRHDGLLDI EDAADYLTIS YNIFAQHDKT VLIGSGDGDK GEYRITFEGN
LWDNSVQRSP RVRFGQVHLL NNYHRGATDT NYPILYAVGM GFDSSILSES NVFNFQGGGA
DEKLIIGAYK GSKFKDNGSW FNGNPASNLN QIALDKCSAL QETEKAAAAN SGKAVPAWAL
ETCTNELEWS PPYAYSAGKS LAVVEKYVLE NAGAGKLEIA LP
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