Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2780 |
Symbol | |
ID | 8133733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3154053 |
End bp | 3155255 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644866068 |
Product | acetate kinase |
Protein accession | YP_003018346 |
Protein GI | 253689156 |
COG category | [C] Energy production and conversion |
COG ID | [COG0282] Acetate kinase |
TIGRFAM ID | [TIGR00016] acetate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0653743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAGTA AGTTAGTACT GGTTCTTAAC TGCGGTAGTT CATCCCTGAA ATTCGCCATC ATCGATGCGA TTAACGGAGA AGAGTACCTG TCTGGTTTAG CCGAGTGTTT CAACCTGCCT GAAGCCCGCA TCAAATGGAA AATGGACGGC GGTAAACACG ACGCCGAACT GGGTGCCGGT GCAGCTCACA GCGAAGCGCT GAACTTCATC GTTAATACCA TTCTGTCTCA GAAGCCAGAG CTGTCTGCTC AACTGGTTGC TATCGGTCAC CGTATCGTTC ACGGCGGTGA GAAGTTCACC CAATCCGCGA TCATCACTGA TGATGTTCTT CAGGGTATCA AAGATTCCGT ACCTTTTGCA CCTCTGCACA ACCCGGCGCA CTTGATCGGT ATCGAAGAAG CACTGAAATC CTTCCCACAC CTGGCTGATA AAAACGTCGC TGTCTTCGAC ACCGCATTCC ATCAGACCAT GCCGGAAGAG TCTTACCTTT ATGCACTGCC GTACAAACTG TATAAAGAAA ACCACATCCG TCGCTACGGT TTCCACGGCA CCAGCCACTA CTTCGTTTCT CGCGAAGCCG CTAAAGTGCT GAACAAACCT GTAGAAGAGC TGAACGTCAT CACTTGTCAC CTGGGCAACG GTGGTTCCGT TACGGCAATC CGCAACGGCG AATGCGTTGA TACCTCTATG GGTCTGACGC CGCTGGAAGG TCTGGTGATG GGTACGCGCT GTGGCGATAT CGACCCGGCT GTGATTTTCC ACCTGCACGA CGCACTGGGC ATGGACGTAG CCAGCATCAA CAAATTGCTG ACTAAAGAAT CCGGCCTGCA AGGTCTGACA GAAGTGACCA GCGACTGCCG CTACGTTGAA GATAACTACG AGACGAAAGC AGACGCTAAA CGTGCAATGG ACGTTTACTG CCACCGTCTG GCTAAGTACA TCGGTTCTTA CAGCGCCCTG ATGGAAGGTC GTCTGGATGC CGTGATCTTT ACCGGTGGTA TCGGTGAAAA CGCCGCAATG GTTCGTGAAC TGTCGCTGAA AAAACTGGGT CTGCTGGGCT TTGACGTCGA TCACGAACGC AACCTGGCAG CACGCTTCGG TAAAGGTGGC AACATCGCTA AAGATGGCAC CCGTCCAGCG CTGGTTATCC CGACCAATGA AGAATTGGTC ATCGCTGAAG ACGCTTACCG TCTGACTGCG TAA
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Protein sequence | MSSKLVLVLN CGSSSLKFAI IDAINGEEYL SGLAECFNLP EARIKWKMDG GKHDAELGAG AAHSEALNFI VNTILSQKPE LSAQLVAIGH RIVHGGEKFT QSAIITDDVL QGIKDSVPFA PLHNPAHLIG IEEALKSFPH LADKNVAVFD TAFHQTMPEE SYLYALPYKL YKENHIRRYG FHGTSHYFVS REAAKVLNKP VEELNVITCH LGNGGSVTAI RNGECVDTSM GLTPLEGLVM GTRCGDIDPA VIFHLHDALG MDVASINKLL TKESGLQGLT EVTSDCRYVE DNYETKADAK RAMDVYCHRL AKYIGSYSAL MEGRLDAVIF TGGIGENAAM VRELSLKKLG LLGFDVDHER NLAARFGKGG NIAKDGTRPA LVIPTNEELV IAEDAYRLTA
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