| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2758 |
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| Symbol | |
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| ID | 8133711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3128246 |
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| End bp | 3129937 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866046 |
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| Product | trehalose-6-phosphate hydrolase |
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| Protein accession | YP_003018324 |
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| Protein GI | 253689134 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02403] alpha,alpha-phosphotrehalase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACCT CGCTACCCTG GTGGCAAAAC GGCGTAATTT ATCAAATCTA CCCGAAGAGC
TTTCAGGACA GTACCGGAAA TGGGATTGGC GACATCGCCG GCATCACTGC ACGACTCGAT
TACCTGCAAC AACTAGGCGT TGATGCGATC TGGCTGACTC CGGTTTATCT TTCCCCTCAG
GTTGATAACG GTTATGACGT CGCCGATTAC TGTGCCATCG ACCCAACCTA CGGCACGATG
GCCGATATGG AAACGTTGAT TGCAGAAGCA CATCGCCGTC GTATTCGCGT CGTCATGGAT
ATGGTGTTCA ACCACACCTC TACGCAGCAC CACTGGTTCC TGAACGCACA GGATCGCCGT
AGTCCCTATC GACATTTTTA CATCTGGCGT GATGGCAATG ACGGTGCGCT ACCCAATAAC
TGGCGTTCAA AATTTGGCGG CCCAGCCTGG CAGTGGCACG CGGAGAGCAA ACAGTATTAC
CTGCACCTTT TCGCCACTGA ACAGGCTGAC CTGAATTGGG AACACCCACG TGTACGGGAT
GAATTAAAGC AGGTCTGTGA ATTTTGGGCG GACAAAGGTG TAGACGGACT GCGGCTGGAT
GTGATCAATT TGGTCTCTAA GCAACAGAAT TTCCCGTCAG ACGCTCAGGG CGATGGACGC
CGTTTCTACA CCGATGGACC ATTGATTCAT GATTACTTGC AGGAATTCAG CCGGGATGTT
TTTCAGCCCC GCGGTTTAAT GACCGTCGGC GAGATGTCAT CGACCTCGCT GGAGCACTGC
CGTCGCTACG CCGCGTTGGA CGGTAGTGAA CTCTCCATGA CGTTCAATTT TCACCATTTG
AAAGTCGATT ATCCCAATGG GGAAAAATGG ACGCTGGCAG AACCTGATTT CATCCAGCTC
AAGCAGATCT TTACTCACTG GCAGCAGGGT ATGCACAACC ATGCCTGGAA TGCGCTGTTC
TGGTGTAATC ACGATCAGCC GCGTATCGTG TCGCGTTTTT GCGATGAAGG CGAATTCCGC
GTGCAATCCG CCAAAATGCT GGCGATGGTG CTTCACGGCA TGCAGGGCAC GCCCTATATC
TATCAGGGCG AAGAACTGGG GATGACCAAT CCCGGCTATA CGCAGATTGA ACAATACCGG
GATATTGAAA GCCTGAATCA ATTTGCTGAA CAGCGCGAGC GGGGTCAGCC AGATGCACAA
ACCTTGGCAA TCCTCGCCAG CAAATCACGC GATAACGGCC GTACACCGAT GCAATGGGAT
GCCAGTAACC ATGCCGGATT TACGACCGGC ACACCGTGGA TAGCACCGTG TCAAAACTTT
GCCCACGTCA ACGCAAAGCA AGCATTGGCA GATAAAGCGT CCGTTTTCTA CACCTATCAA
CAGCTTATCG CTATGCGTAA AGCGCTACCA TTACTGACAT ACGGAGACTA TCAGGATTTG
CTGCCAGACC ATCCCAGCAT CTGGTGCTAT CAGCGTATCT GGGAAGAACA ACGGCTTCTG
GTGCTGGCAA ATCTCAGTAA ACAGCCTCTG CGCTGGCAGC CTCCCATTGA TATCCACGGC
CGCCGCTGGC GACTGTTATT CAGCAATTAC TCTGATGCTC AACCTCAACC CGCAATACTG
GAGCTACGTC CGTTTGAAGC CATATATTGG GTACAAGGCA TGCAGGAGAA AGAGGATAAG
ATTCAGGAAT AG
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| Protein sequence | MTTSLPWWQN GVIYQIYPKS FQDSTGNGIG DIAGITARLD YLQQLGVDAI WLTPVYLSPQ
VDNGYDVADY CAIDPTYGTM ADMETLIAEA HRRRIRVVMD MVFNHTSTQH HWFLNAQDRR
SPYRHFYIWR DGNDGALPNN WRSKFGGPAW QWHAESKQYY LHLFATEQAD LNWEHPRVRD
ELKQVCEFWA DKGVDGLRLD VINLVSKQQN FPSDAQGDGR RFYTDGPLIH DYLQEFSRDV
FQPRGLMTVG EMSSTSLEHC RRYAALDGSE LSMTFNFHHL KVDYPNGEKW TLAEPDFIQL
KQIFTHWQQG MHNHAWNALF WCNHDQPRIV SRFCDEGEFR VQSAKMLAMV LHGMQGTPYI
YQGEELGMTN PGYTQIEQYR DIESLNQFAE QRERGQPDAQ TLAILASKSR DNGRTPMQWD
ASNHAGFTTG TPWIAPCQNF AHVNAKQALA DKASVFYTYQ QLIAMRKALP LLTYGDYQDL
LPDHPSIWCY QRIWEEQRLL VLANLSKQPL RWQPPIDIHG RRWRLLFSNY SDAQPQPAIL
ELRPFEAIYW VQGMQEKEDK IQE
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