| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2744 |
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| Symbol | |
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| ID | 8133697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3110739 |
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| End bp | 3112190 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866032 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003018310 |
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| Protein GI | 253689120 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGT TTGAACAGCT CGCTCACCAG ATTCGTGAGC AACTTCAGGA AGGGATTTGG
CAGCCGGGCG ACAAACTGCC CTCGCTGCGG GAGAAATCAC TGCATTCGGG TATGAGCCTG
ATGACTGTAC TGCACGCCTA TCAACTGCTG GAAAGCCAGG GGTTGATTGT GTCGCGTCCG
CAGTCGGGTT ATTACGCGGC GCCACAGCTG TCCGCATTAC CCGCAGACAG TCTGCATTCG
CCTGTGGGGC AGGAACGCGT TCAGCTTACC GAAGACGTCG ACGTCAATGC GTTCATTTTT
GACGTGCTTC AGGCTAGTAA AGATCCCGCG GTGATGCCGT TTGGATCGGC GTTTCCCGAC
CCGCAGCTTT TTCCACAACG CCAGTTGACG CGCTCGTTGG CCTCGGTAGC GCGTCATATG
CAGCCGCAAA GCGCACTGGA TAATTTACCG CCGGGTAATG AGAGCCTGAG GAAGAATATC
GCCCAGCGCT ATGCCTTGCA GGGGATCGCC GTCTCGCCCG ATGAGATTGT GATTACGGCG
GGTGCGATGG AATCCCTGAA CCTCAGCCTT CAGGTGCTGA CGGAACCGGG TGACTATGTA
GTGATCGAAT CTCCGGCGTT TTACGGCGCG CTACAGGCGA TTGAACGTCT TAAGCTCAAG
GCGATTGCGA TTGCAACCGA TCCGCAGCAG GGCATCGATC TTGACGCGTT GCAGCAGGCG
CTGAACGACT ACCCGATCAA AGCCTGCTGG CTGATGACCA ATTTTCATAA CCCACTCGGC
TGCACGTTGT CCTGGGAGAA GAAGCAGCAA CTGGTGGCGA TGCTGGAAAA ACACGGTGTC
GGGCTGGTAG AAGATGACGT CTACAGCGAG CTTTATGCTG GCCTGCAACG TCCGCTACCT
GCGAAGGCGT TGGATAAAAA AGGGACGATT CTGCACTGTT CCTCGTTTTC TAAAAATCTG
GTAGCCGGGT TTCGTGTCGG CTGGGTAGCC GCAGGGCGTT ATGCGGGAAG CATTCAGCGT
TTACAGTTGA TGAGTACATT ATCAACCAGT GCACCGATGC AACTGGCGAT TGCAGATTAT
CTGGCGACCA GCAGCTACGA CAGCCATCTG CGCCGTCTGC GGCGGGCGCT GGAGCAGCGC
AAACACGCGG CGTTACAGTC GCTACGTCGG CACCTTCCGG GCGACGTGCG TATTAATCAT
TCCCAAGGCG GTTATTTTCT CTGGCTGGAA TTGCCTGAGG GAATCAGCAG CACGGAGCTA
TACCGTCGTG CGCTGGCGCG GGGTGTCAGT ATTGCGCCGG GAAAAATGTT TACGACTGGT
GATAAATACG ATCGCTACTT TCGTTTCAAC GCCTCTTATG CGTGGGACGA TCGCTGTGAA
CAAAGCGTGA TCGTATTGGC CGCGCTGATC CGAACCCAGA TAGGTGAGCG ACCGCCCCGA
TCACCCCTTT AG
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| Protein sequence | MAKFEQLAHQ IREQLQEGIW QPGDKLPSLR EKSLHSGMSL MTVLHAYQLL ESQGLIVSRP
QSGYYAAPQL SALPADSLHS PVGQERVQLT EDVDVNAFIF DVLQASKDPA VMPFGSAFPD
PQLFPQRQLT RSLASVARHM QPQSALDNLP PGNESLRKNI AQRYALQGIA VSPDEIVITA
GAMESLNLSL QVLTEPGDYV VIESPAFYGA LQAIERLKLK AIAIATDPQQ GIDLDALQQA
LNDYPIKACW LMTNFHNPLG CTLSWEKKQQ LVAMLEKHGV GLVEDDVYSE LYAGLQRPLP
AKALDKKGTI LHCSSFSKNL VAGFRVGWVA AGRYAGSIQR LQLMSTLSTS APMQLAIADY
LATSSYDSHL RRLRRALEQR KHAALQSLRR HLPGDVRINH SQGGYFLWLE LPEGISSTEL
YRRALARGVS IAPGKMFTTG DKYDRYFRFN ASYAWDDRCE QSVIVLAALI RTQIGERPPR
SPL
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