Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2693 |
Symbol | |
ID | 8133646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3056147 |
End bp | 3057346 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865981 |
Product | histidine kinase |
Protein accession | YP_003018259 |
Protein GI | 253689069 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.751419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT CGATCTTTCT GTCAGAAAAA ATGTCGCTGT GGCGCTGGCT GTGTTTCCGT ATTATTTCTC TGCTGCTCGC CACCCTGCTC ATCATCGCTA CCCTGATGTG GCTGCGCTTC GCCGTCAACA ATGTCTACGT CGAACAGCAG ATGCCGGATG AGGTGCGGGC TGAGTTTCAG CTGTTAAGCA AACAGAAAGA TTACGGTAAT CCTCGCTACC AGCAGATTAT CAATCAGTAT TACGGCCCGG ATTTCTTTGT GCCGAATATT GCCAGCACCG ACTGGCTGGT GCTATCGATC ATGGTTCTGA TCGCCTTGCC CATCGTCGTC GTCGTGGTTT TGTGGCGGGC GAGGCCGCTG TCACAGCAAT TTTCCAATAT CGCCAGCGCC GCACGCGACG TCGCTCAGGG AAAGTTTGAT ACGCGCACGC AGCTTGTCGA ACAGGCACCG ATGGAGCTGG TGACGCTGGC AGACGACTTT AATAACATGA CCGCACAGTT GGAGCGCTAC GAACGGGAAC TGCGTGAATC CAGCGCGGCG CTGGCTCACG AACTGCGCAC ACCGTTAAAT GCAGCGATGG GTCGCGTTCA GGGCATGCTT GATGACGTCT TCCCACGAGA TAAATCACAG CTGACAATGG TCATCAAACA GCTCGAACAG CTCAACCACG TCATTCAGGA TCTGCACTTC CTGTCACTCG CCAGAGCCGG ACAACTGCAG CTGGTCCACA CCCCTTTCTA CTTCGACGAG CTCATCACTG AGCGACTGAC CTGGTATCGG CCTCAGTTAG AACAAGCCGG GTTCCAGACG CATACGCATA TTGAACAACG CGACTTTTGC TTTGCAGACC GCGAACGGTT AGGACAGGTG TTCTCGATTT TGATTGAGAA TGCATTAAGT TACGCCAGCG ATGGCCGCTA TCTGGCAATT GATGTCCGTG AAACGACGCT GCGTGAAAAC GCGCCGTGCT GGCAGATTAC CGTTTCCGAT CACGGTCCGG GGATTGAGCC AGAATCGCTG CCCCTGCTTT TTGACCGCTT CTGGCGTGCA GAGCATTCGC GTGGACGGCA CTCCGGCGGT AGCGGGCTTG GGCTATCTAT CGCGTCAGCC ATTATCACTG CACATGGTGG CGCTATTTAT GCAGAACACG GCAAGAACGG CGGACTTGTC ATCATAATGA CGCTGCCTCG TAGTACTTAA
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Protein sequence | MKKSIFLSEK MSLWRWLCFR IISLLLATLL IIATLMWLRF AVNNVYVEQQ MPDEVRAEFQ LLSKQKDYGN PRYQQIINQY YGPDFFVPNI ASTDWLVLSI MVLIALPIVV VVVLWRARPL SQQFSNIASA ARDVAQGKFD TRTQLVEQAP MELVTLADDF NNMTAQLERY ERELRESSAA LAHELRTPLN AAMGRVQGML DDVFPRDKSQ LTMVIKQLEQ LNHVIQDLHF LSLARAGQLQ LVHTPFYFDE LITERLTWYR PQLEQAGFQT HTHIEQRDFC FADRERLGQV FSILIENALS YASDGRYLAI DVRETTLREN APCWQITVSD HGPGIEPESL PLLFDRFWRA EHSRGRHSGG SGLGLSIASA IITAHGGAIY AEHGKNGGLV IIMTLPRST
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