Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2687 |
Symbol | |
ID | 8133640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3048279 |
End bp | 3049013 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644865975 |
Product | putative esterase |
Protein accession | YP_003018253 |
Protein GI | 253689063 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCTG ATACACCGGC CACCCACTTC GTATTGATAC ACGGTGCCTG GCACGGCGGC TGGTGCTGGT CGCGTGTGAC CGAACGGCTT AATGCTGCGG GTTTCGCCGC CACGGCCCCG ACGCTGACAG GGCTGGCAGA ACGCCGTGAC GCGCTCTCGC GCGGCATTAA CCTCTCCACC CACATTAACG ACATTATCGC CGCTATTCAG CAACAGGGCG GGCATAACGT CACACTGGTC GGCCACAGCT ACGGCGGGTT TCCCACGACG GCCGCCGCGT ATCACTTGCC TGACATCGTG AGCCACCTGA TCCTGCTGGA CGCATTTTTA CCCGCACCGG GTGAGAAGTT GCTGGACCAC GCTCCCGATC TCATCACAGC CTACCAGACG CAGGCGGCGC GCGATCCCAC ATGGCACATC CCTGCGCTTC CATCGCTGCT GTTTGGCGTG AATGAGGCGG ATCGCGACTG GGTCGATGCC CGCCTGACGC CGCAGCCGGT GAATACCTAT TTTGAACCGA TAGCCTTACC GCCCGCGCCA CCGACGCTGA AAAAGACCTA CATCCGCTGC ACACGTGCGG CAGGAAACTA TCTCACCACC TCGATACAAC GTGCCCAAAC CGATCCAACC TGGCGTTTTC TCACGCTCGA CAGCGACCAC GATGCGATGA TCGATGCGCC TGACGCGCTC ACCACGCTAC TGACATCATC GTTGACAACC CGCACACCTC TGTGA
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Protein sequence | MSADTPATHF VLIHGAWHGG WCWSRVTERL NAAGFAATAP TLTGLAERRD ALSRGINLST HINDIIAAIQ QQGGHNVTLV GHSYGGFPTT AAAYHLPDIV SHLILLDAFL PAPGEKLLDH APDLITAYQT QAARDPTWHI PALPSLLFGV NEADRDWVDA RLTPQPVNTY FEPIALPPAP PTLKKTYIRC TRAAGNYLTT SIQRAQTDPT WRFLTLDSDH DAMIDAPDAL TTLLTSSLTT RTPL
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