Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2679 |
Symbol | |
ID | 8133632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3038611 |
End bp | 3039225 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644865967 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003018245 |
Protein GI | 253689055 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAC ATATGAATAC TCCGTCCCCA CGCGGGCCGT CGGACCATAG CGTTCGAGAT CAGATTGTGG AAGCGGCTAC TGAGCACTTC GGACACTTTG GGTATGAGAA GACAACCGTG TCCGATCTGG CCAAAGCGAT TGGCTTTTCT AAGGCATACA TCTACAAGTT TTTTGATTCC AAACAGGCCA TCGGGGAGAT GATTTGTACT AATCGACTGG CAACGATTAT GGATATTGTC AACGCCGCGA TGATGGATGC GCCAACGGCT TCAGAAAAGC TGAGGCGTCT GTATAAGGCC TTGATAGAAG CGGGTAGCGA TTTATTTTTT CACGATCGCA AGCTTTATGA GATCGCCGCG GTATCCTCGC GCGAACGGTG GCCTTCAGCC GTTGCGTATG AAGAAAAATT ACGCCAGCTT GTTCAGCAAA TTCTTCTCGA GGGACGACAA TCCGGGGAAT TTGAACGCAA GACGCCGCTG GATGAGGCGG CAGATGCCAT CTATCTGGTC ATGCGCCCTT ACGCTTGCCC TATTCAACTG CAATATAACC TGGATTCGTC AGCGTCCGCT GCGGTGTTAC TGCCGTCGTT GATATTGCGT AGTCTGGCAC CATAA
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Protein sequence | MTKHMNTPSP RGPSDHSVRD QIVEAATEHF GHFGYEKTTV SDLAKAIGFS KAYIYKFFDS KQAIGEMICT NRLATIMDIV NAAMMDAPTA SEKLRRLYKA LIEAGSDLFF HDRKLYEIAA VSSRERWPSA VAYEEKLRQL VQQILLEGRQ SGEFERKTPL DEAADAIYLV MRPYACPIQL QYNLDSSASA AVLLPSLILR SLAP
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