Gene PC1_2543 details

Gene Information

• Locus tag: PC1_2543
• Symbol: mgsA
• ID: 8133490
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 2906392
• End bp: 2906850
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 644865826
• Product: methylglyoxal synthase
• Protein accession: YP_003018110
• Protein GI: 253688920
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1803] Methylglyoxal synthase
• TIGRFAM ID: [TIGR00160] methylglyoxal synthase

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00778094
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGTTCA CCACCCGTAC CATCGCCGCG CAAAAACATA TTGCGCTGGT AGCACACGAC 
CACTGTAAAC AATCCTTGCT GGATTGGGTT GGTACGAATA AAGAACAGCT CAAAGAGCAC 
ACGCTTTACG CCACCGGAAC CACCGGGAAC CTGATTCAGT TGAATACGGG GCTGCCCGTA 
AAAAGCATGC TGAGCGGGCC AATGGGAGGC GACCAGCAGG TTGGCGCACT GATCTCCGAA 
GGGAAAATCG ATTTGATGAT CTTCTTTTGG GATCCACTTA ACGCCGTACC ACACGATCCC 
GATGTGAAGG CGCTGCTGAG GCTGGCTACG GTTTGGAACA TTCCCGTGGC CACCAACCGT 
GCAACGGCGG ATTTTCTGGT CAATTCTGCG CTATTTAAAG AACCCGTACA GATCGCCATC 
CCCGATTATC AACGCTATCT GCAAGACCGC CTGAAATAG 

 

Protein sequence

MEFTTRTIAA QKHIALVAHD HCKQSLLDWV GTNKEQLKEH TLYATGTTGN LIQLNTGLPV 
KSMLSGPMGG DQQVGALISE GKIDLMIFFW DPLNAVPHDP DVKALLRLAT VWNIPVATNR 
ATADFLVNSA LFKEPVQIAI PDYQRYLQDR LK