| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2412 |
|---|
| Symbol | napG |
|---|
| ID | 8133358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 2772998 |
|---|
| End bp | 2773690 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644865694 |
|---|
| Product | quinol dehydrogenase periplasmic component |
|---|
| Protein accession | YP_003017979 |
|---|
| Protein GI | 253688789 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00397] MauM/NapG family ferredoxin-type protein
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCC CGGAACATTC ATCACCCGCT CGCCGTCGCT TTCTGCGTGA CGCCGTCCGT
GCCGTTGCAG GTTTATCCGC CGCGGTCACG ATACTCGGCA TTCAGCAGCG ACGCGCTCAG
GCCGACGCGA TCCGGCTACG GCCACCGGGT GCGCTGTCGG AAGCGGCGTT TTCCGGTGCC
TGCATCCGCT GTGGCCAATG TGTTCAGGCC TGCCCGTACG ACACACTGAA ACTAGCAACG
CTGGTCTCCG GTTCCGCCGC CGGAAGCCCT TACTTTGTCG CACGCGATAT CCCGTGCGAG
ATGTGTGAGG ACATCCCCTG TGTCGTCGCT TGCCCCAGCG GCGCCTTACA GCCGCTGGAC
ACCATCGATG ACGCCCGCAT GGGATTAGCG GTGCTGCTCG ACCAGGAGAA CTGCCTGAAC
TATCAGGGGT TACGTTGTGA TGTGTGCTAT CGCGTCTGTC CCCTCATCGA TAGCGCCATC
ACGCTGGAGC CGGAGCGCAA TGCCCGAACC GGAAAACACG CCCGTTTTCT GCCTACGGTG
CATAGCGATG TCTGTACCGG CTGCGGCAAA TGTGAAAAAG CCTGCGTACT GGAACAGCCT
GCGATAAAGG TCTTGCCGCG CGCGCTGGCA AAAGGCGAAC TCGGACACCA CTACCGTTTC
AGTTGGCTGG AGGCACGCAA TGGCAAATCG TAA
|
|---|
| Protein sequence | MARPEHSSPA RRRFLRDAVR AVAGLSAAVT ILGIQQRRAQ ADAIRLRPPG ALSEAAFSGA
CIRCGQCVQA CPYDTLKLAT LVSGSAAGSP YFVARDIPCE MCEDIPCVVA CPSGALQPLD
TIDDARMGLA VLLDQENCLN YQGLRCDVCY RVCPLIDSAI TLEPERNART GKHARFLPTV
HSDVCTGCGK CEKACVLEQP AIKVLPRALA KGELGHHYRF SWLEARNGKS
|
|---|
| |