Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2409 |
Symbol | |
ID | 8133355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2769656 |
End bp | 2770192 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644865691 |
Product | ferredoxin-type protein NapF |
Protein accession | YP_003017976 |
Protein GI | 253688786 |
COG category | [C] Energy production and conversion |
COG ID | [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain |
TIGRFAM ID | [TIGR00402] ferredoxin-type protein NapF |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAACC TTTCCCGACG TTCCCTACTG ACTGGAGGCC TACAGCGGGC AGACAACGCG TTGCGTCCGC CGTGGAGCGG CGTAGAAAGT CGGTTTCTGA GCCAGTGCAT ACGCTGTAAC GCCTGCATTG ATGCCTGCGA TTCGGGGATC ATTCAGCGCG GCTCGGGCGG TTTTCCCACC ATCGATTTTC AGCGCGGCGA ATGCACGTTC TGCTACGACT GCGCGCGTGC CTGTCCACAA GCGCTGTTCG CGGAGAGCCA CACCACGCCG TGGGAATACC ACCTGACAAT TCAGGACGCC TGTTTGTCGC TGCATCAGGT GGAATGCCGC AGCTGTCAGG ATGCGTGTGA CGCCGGGGCG ATACGGTTTC GTCCCGCCAT TGGGCGCGTT GCCGCACCGT CAATCGACGA CGATGCCTGT ACCACCTGTG GCGCCTGTAT TTCCGGATGC CCTGTCGGCG CGATATCGAT GAAAAAGATC ACTGCGGGAC ATCACCCCGC ACCAACGCGT CTCCTGACGC AACAGGAAAA CCGATGA
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Protein sequence | MTNLSRRSLL TGGLQRADNA LRPPWSGVES RFLSQCIRCN ACIDACDSGI IQRGSGGFPT IDFQRGECTF CYDCARACPQ ALFAESHTTP WEYHLTIQDA CLSLHQVECR SCQDACDAGA IRFRPAIGRV AAPSIDDDAC TTCGACISGC PVGAISMKKI TAGHHPAPTR LLTQQENR
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