Gene PC1_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2396 
Symbol 
ID8133341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2755967 
End bp2756713 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content55% 
IMG OID644865677 
Producturea carboxylase-associated protein 2 
Protein accessionYP_003017963 
Protein GI253688773 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03425] urea carboxylase-associated protein 2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAGA TACAGACATC GACAAACACA TCGACAGGCC GAACCCCATT TGATGAAGAA 
ATCGTTCCGG GCGGAGGGCA TACCTCTTTC ATTCTCAAGC GCGGACAGAT TCTGCGCATC
GAAGATGTTG AAGGCGGCGG CAATGTTGGC CTGCTGTTGT TCAATGCGCA CCAGACCAGC
GAACGCCTGA ACCTGCCGGA TACCCTGAAA GGGCAACATA CCGCCAGGCT GACGGTCGGG
CACTGTCTCT ATTCCGATAT GGGGCGCGTG CTGGCGGCGA TCGTTACCGA TACGTGCGGC
TGGCACGACA GCTTTGGCGG CGTGCTCAAT GCGCAGGAAG TACAGGAGAA ATACGGGCAA
GGGCGTTATC AGGAACGGCG CAACGGCTTT TTTCGTAACG GGATGGATAA TCTGCTGGTC
GAGATGGGGA AATGGAACCT CAATCTGCAA GATCTGCTGA TGGTGATCAA CCTGTTCAGC
AAAGTCACCG TGGATGAGCA AGGGCAATTT CATTTTCACG CCAATCATTC TCAGGCGGGG
GACTACATCG AGCTGTATGC GCCGATGGAT ACGCTGGTGG TGCTGACCGC CTTGCAACAC
CCGATGGATC CTAACCCGAC TTATGCGCCG CGCCCGATTG CACTTACCTG GAGCCGAGCG
GAAGGCGAAG ATGTTGCCGC GTACTGCCGT GCGTTCCGTG AGGAAAATGC GCGTGCGTTT
CACAATACCG AACGCTTTTA CCTGTAA
 
Protein sequence
MTEIQTSTNT STGRTPFDEE IVPGGGHTSF ILKRGQILRI EDVEGGGNVG LLLFNAHQTS 
ERLNLPDTLK GQHTARLTVG HCLYSDMGRV LAAIVTDTCG WHDSFGGVLN AQEVQEKYGQ
GRYQERRNGF FRNGMDNLLV EMGKWNLNLQ DLLMVINLFS KVTVDEQGQF HFHANHSQAG
DYIELYAPMD TLVVLTALQH PMDPNPTYAP RPIALTWSRA EGEDVAAYCR AFREENARAF
HNTERFYL