Gene PC1_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2003 
Symbol 
ID8132947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2298622 
End bp2299812 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content54% 
IMG OID644865293 
Producttryptophan synthase subunit beta 
Protein accessionYP_003017580 
Protein GI253688390 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAC TCAACCCTTA CTTCGGTGAA TTCGGCGGAC AATTTGTTCC GCAGATCCTC 
ATGCCGGCGT TACGCCAGTT GGAAGAGGCT TTCGTCAATG CACAAAAAGA TCCTGAATTT 
CAGGCTGAAT TTACCGATCT GCTGAAAAAC TATGCGGGTC GTCCAACGGC GTTAACCCTG 
TGTCAAAACC TGACCGCAGG GACGAAAACC AAGCTGTATC TGAAACGCGA AGACCTGCTG 
CACGGTGGCG CGCACAAAAC CAATCAGGTG CTCGGGCAGG CTCTGCTGGC CAAGCGCATG 
GGTAAAAGCG AAATCATCGC TGAAACCGGT GCAGGCCAAC ACGGTGTCGC GACAGCGCTG 
GCTTGCGCCC TTCTCGGCCT GAAATGCCGC GTTTATATGG GAGCAAAAGA TGTTGAGCGC 
CAGTCGCCGA ACGTCTTCCG TATGCGTCTG ATGGGTGCAG AAGTGATTCC GGTTCACAGC 
GGTTCCTCTA CGCTGAAAGA TGCCTGTAAC GAAGCGCTAC GTGACTGGTC TGGCAGCTAT 
GAAACCGCAC ACTATCTGCT GGGAACAGCG GCAGGCCCGC ATCCTTACCC GACTATCGTG 
CGCGAATTTC AACGCATGAT TGGTGAAGAG ACGAAAGCCC AGATTCTGGA AAAAGAAGGT 
CGCTTGCCGG ATGCGGTATT GGCCTGCGTC GGCGGTGGCT CTAACGCGAT TGGAATGTTT 
GCTGATTTCA TCGACGATAC CAGCGTCCGT CTGATCGGCA TTGAACCTGG CGGCTTGGGC 
ATTGAATCCG GGCAGCACGG TGCACCGTTA AAACACGGTC GCCTCGGTAT CTATTTCGGT 
ATGAAGTCCC CCATGATGCA AACCTCCGAC GGACAAATTG AAGAGTCCTA CTCTATTTCC 
GCCGGTCTGG ATTTCCCGTC CGTCGGCCCG CAACACGCCT ACCTGAACAG CATCGGCCGC 
GCTGACTATG TCTCGATTAC CGATGACGAA GCGCTGGATG CATTCAAAAC GCTCTGCCGC 
AGTGAAGGCA TTATCCCAGC GCTGGAATCC TCTCACGCGC TGGCACACGC CCTGAAGATG 
ATTAAAGCGG AACCAGAGAA AGAGCAACTG CTAGTGGTCA ACCTTTCAGG CCGTGGTGAT 
AAAGACATCT TTACCGTGCA TGATATTTTG AAAGATCGGG GAGAAATCTA A
 
Protein sequence
MTLLNPYFGE FGGQFVPQIL MPALRQLEEA FVNAQKDPEF QAEFTDLLKN YAGRPTALTL 
CQNLTAGTKT KLYLKREDLL HGGAHKTNQV LGQALLAKRM GKSEIIAETG AGQHGVATAL 
ACALLGLKCR VYMGAKDVER QSPNVFRMRL MGAEVIPVHS GSSTLKDACN EALRDWSGSY 
ETAHYLLGTA AGPHPYPTIV REFQRMIGEE TKAQILEKEG RLPDAVLACV GGGSNAIGMF 
ADFIDDTSVR LIGIEPGGLG IESGQHGAPL KHGRLGIYFG MKSPMMQTSD GQIEESYSIS 
AGLDFPSVGP QHAYLNSIGR ADYVSITDDE ALDAFKTLCR SEGIIPALES SHALAHALKM 
IKAEPEKEQL LVVNLSGRGD KDIFTVHDIL KDRGEI