Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1978 |
Symbol | |
ID | 8132922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2271366 |
End bp | 2272271 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644865268 |
Product | hypothetical protein |
Protein accession | YP_003017555 |
Protein GI | 253688365 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCGGA AAAAAATTGG AGTCGCCTTG GGATCCGGGG CAGCGAAGGG ATGGGCGCAT ATTGGTGTGT TTAATGCGTT AACAGAAATG GGGATTGCGG TTGACGTTGT AGCCGGTTGT TCTATCGGCG CGCTGGTTGG GGCGGCGTAT GCCACCAACA ATTTAGCCTC AATGGATCGC TGGGTGAGGG CGTTTGGCTA TTGGGACGTG ATTCGACTGA TGGATCTCTC CTGGCAGCGC GGAAGCTTAT TGCGCGGCGA TCGTGTCTTC AATAGTGTGA AGCATTTGCT CCCGACAACA CAGATTGAAG ACTGTGATAT CAAATATGGC GTGGTGACGA CAAATCTGAG TACAGGGCGT GAGCTCTGGC TGACAGAAGG CGATTTACAT CAGGCTATGC GCGCATCTTG CAGCATGCCT GGCCTGCTAT CCCCCGTTCG GTTTAACGAT TACTGGCTGG TGGATGGCGC GGTAGTTAAC CCTGTTCCTG TTTCTCTGGC ACGGGCTATG GGCGCTGACA TTGTGATTGC GGTTGATCTC CAGCACGACG CCAGTCTGAA TCACCAGAAT TTGCTGTCGA TAAAACCGAC GGAGTCGGAT ATTGATGCGG AAAATGTCCC GCAAGATTGG CGTAGCAGAA TTCGTGGACG TTTACTGCGA GGCCGCCGCC AGCCAACAGA AAGTTCGCCA ACAGCGATGG AGATCATGAG CACATCGATC CAGATTCTGG AAAATCGGTT GAAGATGACC CGGATGGCAG GTGATCCGCC TGATGTACTG CTGCAACCGT ATTGCCCTCA GATCGCGACC TTGGATTTTC ATCGCGCGCA GGAAGCGATT GAAGCGGGCT ATAAGGCAGT AGAAAAGATG CGTGATGAAT TGTTGCCGTT CGCAAAAGAA GCGTAA
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Protein sequence | MQRKKIGVAL GSGAAKGWAH IGVFNALTEM GIAVDVVAGC SIGALVGAAY ATNNLASMDR WVRAFGYWDV IRLMDLSWQR GSLLRGDRVF NSVKHLLPTT QIEDCDIKYG VVTTNLSTGR ELWLTEGDLH QAMRASCSMP GLLSPVRFND YWLVDGAVVN PVPVSLARAM GADIVIAVDL QHDASLNHQN LLSIKPTESD IDAENVPQDW RSRIRGRLLR GRRQPTESSP TAMEIMSTSI QILENRLKMT RMAGDPPDVL LQPYCPQIAT LDFHRAQEAI EAGYKAVEKM RDELLPFAKE A
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