| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1879 |
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| Symbol | |
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| ID | 8132822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2169975 |
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| End bp | 2170724 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644865168 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003017456 |
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| Protein GI | 253688266 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.247337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCCA TTATTGTTGA AGATGAGTTC CTCGCGCAGC AAGAGCTGAG TTACCTCATC
AAACAGCACA GTAATATTAC GATTGAGGCG ACATTTGATG ACGGGCTGGA TGTACTGAAG
TATCTGCAAC ATAACGAGGT CGATGCGATC TTTCTGGATA TCAATATTCC CTCGTTGGAC
GGCGTCTGGC TGGCGCAAAA TATCAGCAAA TTTGCACATA AGCCCTACAT TATTTTTATT
ACCGCGTACA AAGAACATGC GGTGGAGGCC TTTGAGGTCG AAGCCTTTGA TTACATTCTT
AAGCCGTATC ATGAATCACG TATTGTCACG ATGCTGCGTA AGCTGGAAGC AACCTGGCAA
CAGCAGAAAA TGGCATCCAC TGTCGAAACC GGCGCGGCGT CTGGCGCACC GAGAAGCGCA
CAGCACACCA TTAACCTGAT GAAAGACGAA CGCATTATCG TGACGGATAT TAACAATATC
TATTACGCCG CGGCGCAGGA AAAGGTCACG CTGGTTTATA CCCGACGTGA GGAATTCATC
ATGCCGATGA ATATTACGGA ATTCTGTAGC CGTTTGCCGG AAGAGTACTT CTTCCGCTGC
CACCGTTCTT ACTGCGTCAA CCTGACGAAA ATCCGTGAAA TTGTGCCGTG GTTTAACAAC
ACTTATATCC TGCGATTGAA CGATCTGGAT TTTGAAGTGC CGGTAAGCCG GAGCAAGATA
AAGGCGTTCA GGTCATTGAT GCGTCTTTAA
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| Protein sequence | MKAIIVEDEF LAQQELSYLI KQHSNITIEA TFDDGLDVLK YLQHNEVDAI FLDINIPSLD
GVWLAQNISK FAHKPYIIFI TAYKEHAVEA FEVEAFDYIL KPYHESRIVT MLRKLEATWQ
QQKMASTVET GAASGAPRSA QHTINLMKDE RIIVTDINNI YYAAAQEKVT LVYTRREEFI
MPMNITEFCS RLPEEYFFRC HRSYCVNLTK IREIVPWFNN TYILRLNDLD FEVPVSRSKI
KAFRSLMRL
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