Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1672 |
Symbol | |
ID | 8132614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1927062 |
End bp | 1927841 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644864960 |
Product | hypothetical protein |
Protein accession | YP_003017249 |
Protein GI | 253688059 |
COG category | [S] Function unknown |
COG ID | [COG2949] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.485835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAAAC GCCTGACATT CGGTTTGTTA GCCCTCATTG GCGTGCTGCT GCTCTCTGCT TTTGCCCTCG ATCGTTGGAT CAGCTGGAAA ACCGCGCCAT TTATTTACGA TGAACTTCAG GCCTTGCCGA AGCGTCAGGT TGGCGTCGTG CTGGGGACGG CGAAATACTA CCGTACCGGC GTGATCAATC AGTATTACCT GTTCCGTATG CAAGGGACGA TTAACGCCTA CAACAGCGGA AAAGTCAGCT ATCTGCTCCT CAGCGGTGAT AACGCGCTGC AAAGTTACAA TGAGCCGATG ACGATGCGTC GCGATTTGAT CGCCGCAGGC GTTCCGCCTT CGGATATCGT GCTGGACTAT GCGGGGTTCC GCACGCTGGA TTCTATCGTC AGAACACGTA AGGTGTTTGA TACCAACGAT TTCACCATTA TCACCCAGCG TTTCCACTGC GAACGCGCGC TATTCATCGC GCTGCACCTC GGCATTCAGG CGCAGTGTTA TGCCGTGCCT TCACCCAAAA ATATGATGAC CGTACGGGTT CGTGAATTTG GCGCTCGTCT GGGTGCGCTG TTCGACCTGT ATATCCTCAA ACGCGAGCCG CGCTTTTTAG GGCCACAGGT GCCGATTCCC GCAGAACATA CCATCCCAGA GGATGCCCCG GATTATCCTG CCGTCCTACC GGAGCAGGTG CTCCCCTCAC CCGTTCATCA GGGTAAACCT GAGCAACCGG CGAAAGCCGA GCCCGAATCC AAACCGCAGA ACGAACACGC CGCACCGTAG
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Protein sequence | MWKRLTFGLL ALIGVLLLSA FALDRWISWK TAPFIYDELQ ALPKRQVGVV LGTAKYYRTG VINQYYLFRM QGTINAYNSG KVSYLLLSGD NALQSYNEPM TMRRDLIAAG VPPSDIVLDY AGFRTLDSIV RTRKVFDTND FTIITQRFHC ERALFIALHL GIQAQCYAVP SPKNMMTVRV REFGARLGAL FDLYILKREP RFLGPQVPIP AEHTIPEDAP DYPAVLPEQV LPSPVHQGKP EQPAKAEPES KPQNEHAAP
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