| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1668 |
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| Symbol | |
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| ID | 8132610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1921477 |
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| End bp | 1922367 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864956 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003017245 |
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| Protein GI | 253688055 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTGA CCCAGCTCCG CATGTTCTGC CTCGTTGCCG AAACGGGCTC AGTCGCACGC
GCCGCGGAAC AGCTTCATCG GGTGCCCTCA AATCTGACCA CGCGGTTACG CCAGTTGGAA
CAGGAATTGG GTACCGATCT GTTCATCCGC GAGAAACAGC GTCTGCGCCT GTCCCCTATC
GGGCACAATT TCTTATGCTA TGCGCAGCGC ATTCTGGCAC TTAGCGAAGA AGCGATCAGC
ATGACGCGCA CGGGTGAACC CGCAGGTAAT TTCGCGCTAG GCTCGATGGA AAGCACGGCA
GCAACCCGTT TGCCCACGCT ATTAGCGGCT TACCATCAGC GTTACCCCAA CGTCTCGCTG
TCTCTGAATA CCGGCACATC TGGGGAAATT ATTGAGCGTG TGCGCGCGGG AACGCTGGCC
GCTGCGTTAG TCGATGGCCC TGTCGTCTAC GATGAGCTGA ATGGCTGCGC ATGTTTTATG
GAACGCCTCG TGCTGATATC CGACACGACG CACGCGCCGA TTACTCATGC GCGAGATGCG
AGCAACGATA CGCTGTTTGC TTTCCGCCCT AGCTGTTCCT ATCGGAAGCG CCTTGAGAGC
TGGTTCCGAC AGGATGGTGT AGTGCCCGGT ACTATCATGG AGATCCACTC ATACCATGCC
ATGCTTGCCT GTGTGGCCAG TGGTGCAGGA CTTGCCATGC TCCCGTATGC CATCCTGGAA
TCGCTGCCCG CTGGCGCGCG CGTTCAGGTA CATGAATTAC CGCCCGATAT CGCCGATGCG
TCCACGTGGC TCGTCTGGCG ACGTGACGCC TTCGGCCCTA ATGTCGAGGC GCTGAAAAAG
CTCATTATTG AACAGGGCAG CATGATTGAA CCACCCGCTC AGCAGGAATA A
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| Protein sequence | MDLTQLRMFC LVAETGSVAR AAEQLHRVPS NLTTRLRQLE QELGTDLFIR EKQRLRLSPI
GHNFLCYAQR ILALSEEAIS MTRTGEPAGN FALGSMESTA ATRLPTLLAA YHQRYPNVSL
SLNTGTSGEI IERVRAGTLA AALVDGPVVY DELNGCACFM ERLVLISDTT HAPITHARDA
SNDTLFAFRP SCSYRKRLES WFRQDGVVPG TIMEIHSYHA MLACVASGAG LAMLPYAILE
SLPAGARVQV HELPPDIADA STWLVWRRDA FGPNVEALKK LIIEQGSMIE PPAQQE
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