| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1589 |
|---|
| Symbol | |
|---|
| ID | 8132530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 1842295 |
|---|
| End bp | 1843464 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644864877 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003017167 |
|---|
| Protein GI | 253687977 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2807] Cyanate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000189981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGTGA CATCAACGGC CCGCACGCGG GCTTTTCTTT TCTTCACGAT TATCCTATTG
GGATTGAATT TACGCCCTGT ACTGGCAGGG ATTGGTCCGT TGCTGAATCA GATTCAGGCC
GCAACGGGCC TGGATGACAG TATGGCGGGT ATGTTAACTA CGCTCCCCGT GTTCGCTATG
GGGTGGTGTG CGTTATATGG CGGCCAGTTG CAGGCTCGCC TTGGAGAATA TCGGGGAATC
ACGCTGGGTA TTGTGGTGAT TGCCCTGGCG TGTAGCGCAC GCTGGTGGCT GAATAGCGGC
ATTGCTCTGC TGGTTAGCGC AGCGCTTGCC GGGATCGGGA TTGCCTTGAT TCAGGCACTG
GTGCCGTCGT TTATCAAGCT CCATTTTGGC CGCCATAGCA GCCTCCTGAT GGGCTTTTAC
ACCACGGCGA TTATGACCGG CGCGGCGTTT GCGGCTTCAT CCGTTTCCCC GCTGGCAAAT
GTATGGGGCT GGCAAAGCGC GCTGGCCTGT TGGGGGATTG TAGCACTGGT TGCCACGGTG
GCCTGGCGGT GTGTCCCTAA AGCGTATACC GCGAAGCAGG ACACGGCGGC TGTTGTAGCA
ACGCGCCGAA GCGGAATGGA CTGGCTGCTG ATGGTGTTCT TTGGTATTGG TACAGGCGCG
TATACGCTGG TGCTGGCATG GCTGCCACCG TATTACATTC AACTGGGATT AGATGCGACG
CAAAGTGGCC TGATGTTGGG GGGATTAACG CTGACGGAGG TGATTTCCGG TTTGCTGGTG
TCCACGTTCA TCAACCACTT CCCCGATCGG CGCAAACTGC TACTTCCTAT TCTGATCGTG
ATGCTGGTGG GGATGATTGG ACTGATCGTG GTGCCGCTGA CGTTCACGTA TCCGATTATT
ATTATGCTGG GGATTGGTAT TGGCGCGCTG TTCCCGCTGT CGTTGATTGT AGCGTTGGAT
CAGGTGACGG AATCGCATAA GACTGGTTCA CTGATGGGCT TTGTGCAAGG CGGCGGCTAC
ATCCTCGCCA GCCTGATGCC TTTGCTGGCG GGTTTTATAC GCCAGCATAC CGCAGGGCTG
GAACAGGCCT GGATGATTAT GACCGTTGGT GTGGTCGTAT TGATCCTCAT GGCGACGCGT
TTTGCTCCAG TGAAAAGCCC GAGTCGCTAA
|
|---|
| Protein sequence | MVVTSTARTR AFLFFTIILL GLNLRPVLAG IGPLLNQIQA ATGLDDSMAG MLTTLPVFAM
GWCALYGGQL QARLGEYRGI TLGIVVIALA CSARWWLNSG IALLVSAALA GIGIALIQAL
VPSFIKLHFG RHSSLLMGFY TTAIMTGAAF AASSVSPLAN VWGWQSALAC WGIVALVATV
AWRCVPKAYT AKQDTAAVVA TRRSGMDWLL MVFFGIGTGA YTLVLAWLPP YYIQLGLDAT
QSGLMLGGLT LTEVISGLLV STFINHFPDR RKLLLPILIV MLVGMIGLIV VPLTFTYPII
IMLGIGIGAL FPLSLIVALD QVTESHKTGS LMGFVQGGGY ILASLMPLLA GFIRQHTAGL
EQAWMIMTVG VVVLILMATR FAPVKSPSR
|
|---|
| |