Gene PC1_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1575 
Symbol 
ID8132516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1828614 
End bp1829717 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content56% 
IMG OID644864864 
ProductBaseplate J family protein 
Protein accessionYP_003017154 
Protein GI253687964 
COG category[R] General function prediction only 
COG ID[COG3948] Phage-related baseplate assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGA CAGAACCCAA TTTTATTGAA CGCGATGCGG CGAAGATTAC CGCCGAAATG 
ATCGCGAAAT ATGAAGCTGA TTCGGGGAAA ACACTCTATC CGGCGCAGGC CGAACGCCTG 
CTGATCAACC TCTTTGCCTA CCGGGAAACT TTATTGCGTA GCGCGGTCCA GGAAGCCGCC 
AAGCAGAACC TGGTCGCGTT TGCTCGTGCA CCGATGCTGG ATTATCTGGC AGAACTGGTC 
GGCGTCTCCC GTTTGGCGGC GCAGCCGGCA CGTGCAGAGC TTCGCTTCAC CCCTGAAACA 
CCGTTAGTCA GCGATCTGCT GATTCCTGCG GGCACTCGCG TGAGCGCATC GGACAGCGTG 
ATTTTCACTA CCGACAGCGA TGCGCTGCTG AGAATGAACG GTAGCGGCGT CACCGTGTTG 
GCGACCTGTA CCGAAACTGG CGATGTGGGT AATGACTGGC TGCCTGCCCA GATCAGTACG 
CTGCTGGATG AGATTGGCGA CAGTGATTTA AGCGTTATCA ATATTACCAA AAGCAGCGGC 
GGTTCCGCTG AGGAAGATGA CGATCGCCTG CGTGAACGTG TTCAACTGGC ACCGGAATCG 
TTCAGTACGG CGGGATCGAA ACTGGCGTAT CGCTTCCATG CGATGCGGGC ACACCAAAAC 
ATTGTCGATG TGGCGGTGAT GTCACCCGAA CCGGGTGAAG TGGTGCTGTA TCCGTTGCTC 
AGTACTGGCC TGCCGGACAG TAGCATGCTT TCGCTGGTGG AAAGTTTTTG CTCCGACGAA 
CAGGTGCGCC CGCTGACGGA TTTTGTCTCC GCCAAATCGC CTAAACAGGT GGATTACGCC 
ATTAACGCCA AATTGACGTT GTTTAACGGT GAACAGGCTG GCGTCGTTCA GGATGCGGCG 
GAGAAAGCGG TGCAGGCCTG GGTTGAAACC CGTACCGCTA CGCTGGGGCG CGACATTGTT 
CCAAGCCAGA TTATTGCCAC GCTTTCTATT CCCGGCGTGT ATCAGGTGGA ACTGACTTCG 
CCGTCATTGA TGGTGCTTGA TGACAGTGAA TGGGCGAACT GTACGGGCAT CAATGTCAGC 
GTCGTCGGGG TGTCGAATGG CTGA
 
Protein sequence
MALTEPNFIE RDAAKITAEM IAKYEADSGK TLYPAQAERL LINLFAYRET LLRSAVQEAA 
KQNLVAFARA PMLDYLAELV GVSRLAAQPA RAELRFTPET PLVSDLLIPA GTRVSASDSV 
IFTTDSDALL RMNGSGVTVL ATCTETGDVG NDWLPAQIST LLDEIGDSDL SVINITKSSG 
GSAEEDDDRL RERVQLAPES FSTAGSKLAY RFHAMRAHQN IVDVAVMSPE PGEVVLYPLL 
STGLPDSSML SLVESFCSDE QVRPLTDFVS AKSPKQVDYA INAKLTLFNG EQAGVVQDAA 
EKAVQAWVET RTATLGRDIV PSQIIATLSI PGVYQVELTS PSLMVLDDSE WANCTGINVS 
VVGVSNG