Gene PC1_1573 details

Gene Information

• Locus tag: PC1_1573
• ID: 8132514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1827635
• End bp: 1828216
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644864862
• Product: phage baseplate assembly protein V
• Protein accession: YP_003017152
• Protein GI: 253687962
• COG category: [R] General function prediction only
• COG ID: [COG4540] Phage P2 baseplate assembly protein gpV
• TIGRFAM ID: [TIGR01644] phage baseplate assembly protein V

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.551367
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTAT CTCGTCGAAT TGGCACGATA AGCGCGGTGG ATGAGGTTCG CGTGATGGTG 
CGCGTTCGTC TACCAGAGTG TGACAATCTG CGTACGGCTT GGCTGCCGGT ATTACAGCGC 
AATACACAGA ATAATAAGGA TTATTGGTTG CCGGATATTG GCGAACAGGT CGAAGTTCTG 
CTGGACGGAA ACGGCGAGGA CGGCCTGGTG CTAGGGGCGA TTTACTCCGC CGCCGATGTG 
CCAACGCTGG CAGATAAGGA CAAAAGGGCG GTAACGTTCG CTGACGGCGC ACATATTGAA 
TACGATCGCC GAACGCATAC GTTAACGATC AACGGCGGCG TGCAGCATAT TGCGATTAGT 
AGCGGCACTG ACGTGGTGGT TAACGCGCAG CGTGTCACTA TCAATGCGCC AGAGACGACG 
GTGACGGGCA AGCTTCTGGT GCAAGGGCAA CTTACCTACG AGAGCGGGAT GTCCGGTTCT 
GGCGGTGCCA GCCTCAGTGG CGATGTCAGT ATCTCCGGTA ACGTCAGCGC CAGCGGCAGC 
GTCATGGATG CCGGCGGCAA CTCCAATCAC CACTCGCACT AG 

 

Protein sequence

MSLSRRIGTI SAVDEVRVMV RVRLPECDNL RTAWLPVLQR NTQNNKDYWL PDIGEQVEVL 
LDGNGEDGLV LGAIYSAADV PTLADKDKRA VTFADGAHIE YDRRTHTLTI NGGVQHIAIS 
SGTDVVVNAQ RVTINAPETT VTGKLLVQGQ LTYESGMSGS GGASLSGDVS ISGNVSASGS 
VMDAGGNSNH HSH