Gene PC1_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1545 
Symbol 
ID8132486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1799340 
End bp1800359 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content54% 
IMG OID644864834 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003017124 
Protein GI253687934 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID[TIGR03261] putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.061269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGAT CTTTATTTCG CCGCGTCAGT CTGCTCACTG CGTTCACCTG TGCCACGCTG 
GTTAACGCTG CCGCACACGC GGGAACCATC ACTGTCTATA CCTCGCTGGA AGAAGATGAG 
ATCAAAGATT ACGTCGCACA GGCCAAAAAA GATTTGCCCG ACCTAACCAT TAACGTCCTG 
CGCTTGTCTA CCGGCGACCT TGGACCACGG ATTCTGGCCG AATCCAAAAA TCCGCAACAT 
GACGTCATTT GGGGCTGGGC CGTAACCAGC GTGATGGACC CACGGTTGTC TGCATTATTG 
GAACCTTACG ATGCCAAACG CAGTGATAGC CTTGCCGCCA CCTATCGTGC GCCGGATCAC 
AAGTGGTTTG CGGCAACAGG CTATATGGCG GCCTTTTGCG TCAACACCGA AGCGCTAAAA 
GCCAAAAATC TTCCCGTACC CGCCTCCTGG CAGGATCTGA CTAATCCGAT CTACAAGGGA 
GAGGTTGTGA TGCCGAATCC CGTCTCGTCC GGCACAGGTT ACCTACAAAT CGCCGCATTG 
CTGCAAGCCA AAGGGGAACA AAACGGTTGG GCCTTTTTGA AGTCGTTGGA TGGCAATATT 
GCCCAATACA CCAAGTCCGG CTCTCGCCCC TGCAAAGCAG CACGCACGGG AGAATATGCG 
ATTGGCGTAT CGCTGGCTTT TGCCGCTATG CAGTCAATTG AAGAAGGCTA CCCCATCAAA 
ATGGTGATCC CAAACGATGG CGCAGGCTAT GAACTGGAGG CCTCCGCTCT GATGAGCGCA 
GCCAAGAACA AACCGGATGC CAAGCGTTTC CTCGACTGGA CACTCTCCAG CCAGGCCGCC 
GCGCTCTACA CCAAATATAA AGAGATCGTG ACAATCCCTG GCGTTGAACA GTCCAAAGCC 
GCACAAATGG CGGGTCTGCC AGCCGATCTC ACACACGTGC TCTACCCTGT GGACTTCACC 
AAAAGCGCCA ACGAACGCGA CGCCACATTG GCAACCTGGC AAAAATCCAT CGGTCGATAA
 
Protein sequence
MNRSLFRRVS LLTAFTCATL VNAAAHAGTI TVYTSLEEDE IKDYVAQAKK DLPDLTINVL 
RLSTGDLGPR ILAESKNPQH DVIWGWAVTS VMDPRLSALL EPYDAKRSDS LAATYRAPDH 
KWFAATGYMA AFCVNTEALK AKNLPVPASW QDLTNPIYKG EVVMPNPVSS GTGYLQIAAL 
LQAKGEQNGW AFLKSLDGNI AQYTKSGSRP CKAARTGEYA IGVSLAFAAM QSIEEGYPIK 
MVIPNDGAGY ELEASALMSA AKNKPDAKRF LDWTLSSQAA ALYTKYKEIV TIPGVEQSKA 
AQMAGLPADL THVLYPVDFT KSANERDATL ATWQKSIGR