| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1543 |
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| Symbol | |
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| ID | 8132484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1796603 |
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| End bp | 1798255 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864832 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003017122 |
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| Protein GI | 253687932 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | [TIGR03262] putative 2-aminoethylphosphonate ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.264316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGA CACTTCTTCC CCCGCAAACG GCCAGTGACC GCTGGCTTTC TCGTCTGTGT
CTGTGGATCC CACTGCTGGC GCTGCTCATG TTCTTCGGCA TACCGATGCT GAGTATCGTC
TGGCACAGTC TGTTGAACGA TCAAAACGGT ACCGTTGGGC TATCAAATTA TTTGGCGCTA
ATGGATTCGC CCGGCATCTG GCGCGCGACG ATCAACAGCC TGTTACTTGG CATCGTCACC
ACACTGGTGA CGCTCTTGCT GGGGTTTATT GTCGCCTATG GTCTGGAATG TACAGCGATG
CCAGCAAAGC GTTTTATCGC ATTTGCGACC TCGCTGCCGA TACTTGCTCC CTCGCTGGTG
TTGGGATTGG GATTAATTTT TCTGCTGGGA AGAAATGGCA TTATCGGTAA TCTTCTTGGC
GTGCGATTGG ATATTTATGG TTTTTGGGGA TTATTGATCG CCAACGTCCT GTACGCACTA
CCGCAAGCGA TTCTGATCAT TCGTACCACG CTGCGTCATA GCGATACTCG CCAGTATGAA
GCCGCTAACG TTCTCGGTGC CTCGGACTGG CGACAGTTTC TGGATATCAC CCTCCCCGGT
CTGCGATACG GCCTGCTGAG TGCGGCTTTT GTCATCTTCA CCATCACGAT CACAGATTTC
GGTAACGCCA TTGTTATCGG CGGCAACTTC TCGGTACTGG CAACAGAGAT CTACAGCCAG
GTCAGTGGTC AAATGAAATT CGGTATGGGA GCTGTCGTCG GGATCCTGCT CCTGTTACCT
GCCGCTGCAT CGATCTGGAT AGAACGTGCA ACGGCCAGAC GGCAAAAAGC GATCGGCTCA
CATGCGGCGA TCCCACACAT TCCACAACCG CTGCGCACGC GCGATATGTC GTTCTATCTG
GCAACGATGA CGATCGCATT CACGATTGTC GCCGTTATTG GCACCGTCAT TATTGCCAGC
ATGATACGCC TATGGCCGTA TCGGCTGGAT CTGACACTTA AACATTACGA TATCGATCTC
GCTGGAGGCT ATACGCCACT GTGGACGTCG GTCTGGATCT CCGCACTGGC GGCGGTGGTT
GGTACGGTGC TGTTATTCCT GCTGACCTTC GGCGTTCATC GGCAACCCGG CAAAGTTGCC
AATGCCGCGG TACTGCTGAG CGCATTGCCT GTTGCTGTTC CCGGGCTGGT GTTGGGGCTC
TCTTACGTGT TCACGTTCAA TACGGCCGAT CTCCCTTGGG GAATGCTGTA TGGATCGGCA
CTGCTGGTGG CATTATGTAA TTACTACCAC TATCACACGC AAGGCTACAC CACGATGATG
ATGGGAATAC GCAACGTGCC GCATGCGATG GAAGATGCCA CTACTGTTTT AGGCGGCGGC
GTGGTACGTA TTTTACGTGA TGTGTATCTG CCCGCCATGC GCGTAACGTT GATTTCAGTC
GCCATGTTTT TATTCATGCG CTCAATGGTT ACACTATCAG CCGTGATTTT CTTGGTCACA
CCGTCGCTGC CTTTAGGTGC CGTCACCGTT ATGCGATTGG ATGAAGCAGG CTTTACGTCA
CAGGCTGCCG CTTTTTCGAC CTGTATTATG GGCATCGTGG CGATGACCGC ACTCCTTCTG
CATCTTGTGA CAGAAAAGCG ACAATCATGG TAA
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| Protein sequence | MNQTLLPPQT ASDRWLSRLC LWIPLLALLM FFGIPMLSIV WHSLLNDQNG TVGLSNYLAL
MDSPGIWRAT INSLLLGIVT TLVTLLLGFI VAYGLECTAM PAKRFIAFAT SLPILAPSLV
LGLGLIFLLG RNGIIGNLLG VRLDIYGFWG LLIANVLYAL PQAILIIRTT LRHSDTRQYE
AANVLGASDW RQFLDITLPG LRYGLLSAAF VIFTITITDF GNAIVIGGNF SVLATEIYSQ
VSGQMKFGMG AVVGILLLLP AAASIWIERA TARRQKAIGS HAAIPHIPQP LRTRDMSFYL
ATMTIAFTIV AVIGTVIIAS MIRLWPYRLD LTLKHYDIDL AGGYTPLWTS VWISALAAVV
GTVLLFLLTF GVHRQPGKVA NAAVLLSALP VAVPGLVLGL SYVFTFNTAD LPWGMLYGSA
LLVALCNYYH YHTQGYTTMM MGIRNVPHAM EDATTVLGGG VVRILRDVYL PAMRVTLISV
AMFLFMRSMV TLSAVIFLVT PSLPLGAVTV MRLDEAGFTS QAAAFSTCIM GIVAMTALLL
HLVTEKRQSW
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