Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1533 |
Symbol | |
ID | 8132474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1787873 |
End bp | 1788805 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644864822 |
Product | tRNA-dihydrouridine synthase C |
Protein accession | YP_003017112 |
Protein GI | 253687922 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGTTC TGCTTGCCCC GATGGAAGGG GTTCTCGACT CATTAGTGCG GGAACTGCTG ACCGAAGTAA ATGATTATGA CCTGTGTGTC ACCGAGTTCT TACGCGTGGT GGATCAGTGT CTGCCGGTTA AGTCCTTTTA TCGTCTTTGC CCGGAGCTAC ACCATGCCAG CCGCACGCCG TCTGGTACGC TGGTGCGTGT ACAGTTGCTG GGGCAATATC CGCAGTGGCT GGCGGAAAAT GCCGCGCGGG CGGTGGAACT GGGTTCGTAT GGCGTCGATC TTAACTGCGG CTGCCCGTCG AAGCTGGTGA ACGGCAGCGG GGGCGGGGCG ACGCTGTTGA AAGATCCCGA GCTGATTTAT CAGGGCGCGA AAGCCATGCG TGAGGCGGTG CCTGCCCATT TGCCGGTCAC GGTGAAAATT CGGCTGGGCT GGGATTCCGG CGATCGCCAG TTTGAAATTG CCGATGCGGT GCAGCAGGCG GGCGCAAGCG AACTGGTCGT GCATGGCCGT ACGAAAGAAG ACGGTTATAA AGCCGAATGC ATTAACTGGC AGGCGATAGG CAAAATCCGC CAGCGGTTGC GGATTCCGGT GATCGCCAAC GGCGAAATCT GGGACTGGCA GAGTGCGCAG GACTGTATGG CGACAACGGG GTGCGACGCA ATTATGCTCG GACGGGGCGC GCTAAACGTG CCGAACCTGA GTCGCGTCAT TAAGTATAAC GAACCGCGTA TGCCGTGGCC TGAGGTCATG CTGCTGCTAC AAAAATATGT GCAGTTGGAA AAGCAGGGCG ACACCGGGAT GTATCACGTC GCACGTATCA AACAGTGGCT CGGCTATTTG CGTAAAGAAT ACGATGACGC CACCGAGTTA TTCAGCGAGA TTCGCACCCT GAAAACGTCG GCGGACATCG CACGCGTGAT CGGTGAGCCG TAG
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Protein sequence | MRVLLAPMEG VLDSLVRELL TEVNDYDLCV TEFLRVVDQC LPVKSFYRLC PELHHASRTP SGTLVRVQLL GQYPQWLAEN AARAVELGSY GVDLNCGCPS KLVNGSGGGA TLLKDPELIY QGAKAMREAV PAHLPVTVKI RLGWDSGDRQ FEIADAVQQA GASELVVHGR TKEDGYKAEC INWQAIGKIR QRLRIPVIAN GEIWDWQSAQ DCMATTGCDA IMLGRGALNV PNLSRVIKYN EPRMPWPEVM LLLQKYVQLE KQGDTGMYHV ARIKQWLGYL RKEYDDATEL FSEIRTLKTS ADIARVIGEP
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