Gene PC1_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1499 
Symbol 
ID8132440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1749771 
End bp1750955 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content36% 
IMG OID644864789 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003017079 
Protein GI253687889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA GGTATATCAC CGTAGCCTCC CTTATTATTG GACAAGGGTT AACAGGTTCG 
ATTATTTCAT TGCTGACGCT TACGTCAACT TTAGTGGGAA ATAGTCTCAG TCCATCTCCT 
TATCTTGCAA CCTTGCCCAT TACGGCAACA GTAGTAGGAT CGGCTATTAT GGTCTATTAT 
GCATCGCATT TGATGAATGT CTACGGTAGG CGGACAGCCT TTTCTATAGG TAGCGGAATT 
GGAATTTTAG GTAGCATTTT CGCAGCCATT TCAGTTTATT ATCAAATTTT TAGTTTTTTT 
GTTTTCTCAA CTTTCATTAT GGGATGTGCG ACCGTTTTTA ATCAATATTA TCGTTTCGCA 
GGCGCAGAGG TTTTTGATGA TGAGTCTAGC AAAAAAAAAT GCACATCCCT GATTATAGGC 
GGTGGGGTTA TTGGTGGCGT TATCGGGCCA TTCATCGCCA CAAAAGGAGC ATACCTCATT 
TCGAGTCATC TTTTCCTTGG TACATTTTTC ATCGCCATCG TGATATTTGT ATTTGCATTA 
GGCTCTCAGA TATTTATTTC ACTACCTAAA CCGGTTGTTA TTGATGCTAA AATTAAAAAA 
AACCACCCAG AAAAAGAAAT AAAATCCATA CTATCATCAC ATTATTTTAT TTTAGGAACA 
TTGAGTTGTG CTCTGGGATT CTCTATCATG ACACTAGTTA TGAATGCAAC GCCTTTAGCA 
ATGCATCATG AGCATTATCA AATTCAGGAA AGTGCATTTG TCCTTCAGTG GCATTTTTTA 
GCAATGTATG CTCCTGCACT TTTTCTACCT CTGATAATTT CCAAAATAAA AACAAAGTAT 
ATTATCCAAT TTGGGGCTAT CCTTTTTTTA ATAGGCTCAT TATCATCACT TTATTTTGAT 
GACTTTACAG GATATATCAT CACATTAGTC GCGGTCGGTA TCGGATGGAG TTTTATGTTT 
ACTGGCGGCA CATTTTTGAT TAATCAGATA TCGGATAAAG AAATAAAGCA TAAAATTCAA 
GGAATCAACT CACTCGTTAC TTATATGTTA AATCTTGTCG CTTCTCTGGC TGTGGGATTT 
TTCATGAATA TTCCGCAAGG ATGGTTGATT ATTAATAGTA TGACAATAGC CGTCATGTTT 
TGTTTCCTTG TTTACATGCT CAAAAATATG ACTCGTTACG ATTGA
 
Protein sequence
MNKRYITVAS LIIGQGLTGS IISLLTLTST LVGNSLSPSP YLATLPITAT VVGSAIMVYY 
ASHLMNVYGR RTAFSIGSGI GILGSIFAAI SVYYQIFSFF VFSTFIMGCA TVFNQYYRFA 
GAEVFDDESS KKKCTSLIIG GGVIGGVIGP FIATKGAYLI SSHLFLGTFF IAIVIFVFAL 
GSQIFISLPK PVVIDAKIKK NHPEKEIKSI LSSHYFILGT LSCALGFSIM TLVMNATPLA 
MHHEHYQIQE SAFVLQWHFL AMYAPALFLP LIISKIKTKY IIQFGAILFL IGSLSSLYFD 
DFTGYIITLV AVGIGWSFMF TGGTFLINQI SDKEIKHKIQ GINSLVTYML NLVASLAVGF 
FMNIPQGWLI INSMTIAVMF CFLVYMLKNM TRYD