| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1461 |
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| Symbol | |
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| ID | 8132400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1710820 |
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| End bp | 1712256 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864751 |
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| Product | glycoside hydrolase family 1 |
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| Protein accession | YP_003017043 |
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| Protein GI | 253687853 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.329338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA GATTTCCGCA CGGCTTTATG TGGGGCGGCG CCACCGCAGC GAATCAGGTC
GAAGGGGCCT ACAATATCGA CGGCAAAGGG TTGTCGATTG TGGATGCCAT TCCCGGCGGT
AAAGCGCGTT TAAGCATCGT GGCTTCCGAC GCGTTTGATT TCACGCTGGA TGAACAGCGC
TACACCTATC CTAATCATAA AGGCATCGAT CACTATCATC GCTTCCGCGA GGATATCGCG
CTGTTCGCCG AGATGGGTTT CAAATGCTAT CGCTTCTCCA TTGCCTGGAC GCGCATTTAC
CCGAACGGCA TTGAGCAACA GCCCAACGAA GCGGGGCTAA GCCACTATGA ACAGGTGATT
GATACCTGCA TCGCTCATGG TATCGAGCCC GTGATTACGA TCTCTCACTA TGAAATGCCG
CTGCATCTTG CCACCGCCTT TGGCGGCTGG AAAAACCGTG AGCTAATCAG TCATTTTGAG
CGCTTTGCCC GCACGGTGCT GGAGCGCTTT GGCCACAAAG TGAAATACTG GATGACCTTT
AACGAGATCA ACAGTGCTGC CCATTTCCCG ATTATGAGTC AGGGACTGAC GGTGCAAACT
GGCGCACTGG AGCCACAGGC TAAATTTCAG GCGTGGCATA ACCAGTTTGT TGCCAGCAGC
CTGGCGGTGA AGATTGCGCA TGAGACGAAT CCGCAGATCC AGATTGGCTG TATGATTCTG
TTTGCCACGA ATTACGCCTA TGACTGTAAT CCCGTCAATC AACTGGCGAC GCTGAAAGAG
ACTCAGGCCT TTAATTTCTA CTGTGCGGAC GTGCAGGCGG GCGGGAAATA TCCTTACTAC
GCGAAAAGCC TGTGGCAGTC GCTGGGCGTC ACGCTGGATA TTCAGCCGGG CGATCTGGAA
CTGATTAAAC AGCACACCGT CGATTACATC GGCTTCAGTT ATTACATGTC TTCCACTATC
TATAAAACGG ATCCCGATGC AGCGGCGGCG CACGGCAACC TGCTGGGCGG AGCGCGTAAT
CCGTTTCTGG AAGCCAGCGA GTGGGGTTGG GAAATTGACC CGGTGGGGCT GCGCATTGCG
CTCAATCAAC TGTATGACCG CTACGAGAAA CCGCTGTTTA TCGTCGAAAA CGGCTTGGGT
GCGGTGGATA AGCCGAATGA AGAGCGCTAC ATCGCCGATG ACTACCGCAT CAACTACCTG
CGTCAGCACA TCGAAGCGAT GGCCGACGCG ATTGCCGACG GTGTCGAACT GATGGGATAT
ACCCCGTGGG GCTGTATCGA TCTGGTCAGC ATGTCTACCG GTGAGATGAG CAAACGTTAC
GGCTTTATCT ATGTCGATCT GGATGACACG ATCGCCGGCA GCGGCAACCG CTATAAGAAG
AAATCGTTCC ACTGGTATCA AAAAGTCATT GCCACTAACG GCAGTGATAT CAGCTAA
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| Protein sequence | MSERFPHGFM WGGATAANQV EGAYNIDGKG LSIVDAIPGG KARLSIVASD AFDFTLDEQR
YTYPNHKGID HYHRFREDIA LFAEMGFKCY RFSIAWTRIY PNGIEQQPNE AGLSHYEQVI
DTCIAHGIEP VITISHYEMP LHLATAFGGW KNRELISHFE RFARTVLERF GHKVKYWMTF
NEINSAAHFP IMSQGLTVQT GALEPQAKFQ AWHNQFVASS LAVKIAHETN PQIQIGCMIL
FATNYAYDCN PVNQLATLKE TQAFNFYCAD VQAGGKYPYY AKSLWQSLGV TLDIQPGDLE
LIKQHTVDYI GFSYYMSSTI YKTDPDAAAA HGNLLGGARN PFLEASEWGW EIDPVGLRIA
LNQLYDRYEK PLFIVENGLG AVDKPNEERY IADDYRINYL RQHIEAMADA IADGVELMGY
TPWGCIDLVS MSTGEMSKRY GFIYVDLDDT IAGSGNRYKK KSFHWYQKVI ATNGSDIS
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