| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1425 |
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| Symbol | |
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| ID | 8132364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1669341 |
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| End bp | 1670852 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644864715 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003017007 |
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| Protein GI | 253687817 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.4744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGC GTAATCTCCT GTGGCCCGTT TCCGGCCTGC TATCAGCCAC GCTGCTGCTG
TCAGGCTGCT TCAACGAGCC GGAGGAAAAG CACACCTCGC ATCATGACGG CCGAATCAAA
CTGGCGATGC TTCAACCACC GCGATCCGGC CTGACGCCAC TGAGCGATGA TGCCTTTAAG
CTGTCGCGCT GGAGCACGGC AGAAACGCTA GTGGTGCTCG ACAAGCTCGG CGAAGCTCAG
CCTGCGTTAG CGACAACATG GCAGCAGATC GATGATAAAT CCTGGCGTTT TGAGCTGCGT
CCCAACGTTC ATTTTCACGA TAACACCACG TTAAATGCCG CCACGGTGGT TAATGCGCTC
ACCGTGGCGT CCACCGCCGC CCCCAAGCCC CGCATTCTGG ACGGCGTGCA GTTAACGGTA
AAAGCCGATG GCGATAACGC CGTGATTGTC TCCACGGCTA AGCCGGATCC GCTGCTGCCC
CAGCGCTTAT CCAGCCCACA GCTGGCGATC CTCTCCACCG CGGCATACGG TAAAAATGGC
GTGGTCAATC CGATCAACAC CGGAAGCGGC CCGTTCGTTC TGCGTAGCGT CACGGGCACC
AGCAGCGCGG TATTAGACAG ATTCGACGGC TACTGGGGTG AGAAATCACT GGCCAGCGGG
ATCGACGTCA GCTTTGTCTC TGACGGTGCA GCGCGTGCGG CTGCATTACG TACCGGCACG
GCAGACATTG TCGAAGCCAT TCCGGTTTCT CAGGCACCGC TGCTGGATCA ATCGCTGGTG
CATGAAGTCC CGATGCCGCG TACCAACACG CTGTATCTGA ATACGCGCCA CGGCGTGATG
CAAGATCCTG CAATGCGTGC CGCCGTGCGT GATGCCATCA ATCGCCAACA GCTGGTGGAT
AACGTTTATG AGAAGCGCGC CGATATCGCG CAGGGTCTGC TAGGTCCCGC GTTGCCGTGG
GCGGCAGAAC TGCGCCAGCC GGTGGCGAAT CCGGTCAAAG CCGGTACGCC TGCGGGTGCG
ACCATCACGC TGGCAACCTT CAGCGATCGC GCCGAGCTGC CTGAGGTGGC AGTCTATCTG
GCACAGCAGC TTACCGCCGC TGGATTTACG GTGAAACAGG TAGTGCGTGA GTATGCGCAG
ATTGAGTCCG ACGCGCTGGC AGGCAAGTTT GACGCCTTTA TTTTATCCCG CGCTACCGTG
CTGGATTCTG GCGATCCGGT GGCTTACCTG TACAGCGATT TTGCCTGCGA AGGGTCATTC
AACATCGCGC AACTGTGCCG CCCGGAAATC GATCAGGCGT TACAAAAAGC GGCTGCGATT
CCTGCTGGCG TTGCACGCCG TCAGGCCATC ATGCAGGCAG AAAACCTGAT TCTTGCCAGC
GATGCTGCGA TTCCGATGCT GCATGAGCGC GTCATTCAGG GTGAAAGCGC ACAGGTAAAA
GACGCACTGC GCGACCCGCG TGAACGCACG CTGATTAACT CTACCACGCA TATTGCTACC
GACGCGAAAT AA
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| Protein sequence | MNMRNLLWPV SGLLSATLLL SGCFNEPEEK HTSHHDGRIK LAMLQPPRSG LTPLSDDAFK
LSRWSTAETL VVLDKLGEAQ PALATTWQQI DDKSWRFELR PNVHFHDNTT LNAATVVNAL
TVASTAAPKP RILDGVQLTV KADGDNAVIV STAKPDPLLP QRLSSPQLAI LSTAAYGKNG
VVNPINTGSG PFVLRSVTGT SSAVLDRFDG YWGEKSLASG IDVSFVSDGA ARAAALRTGT
ADIVEAIPVS QAPLLDQSLV HEVPMPRTNT LYLNTRHGVM QDPAMRAAVR DAINRQQLVD
NVYEKRADIA QGLLGPALPW AAELRQPVAN PVKAGTPAGA TITLATFSDR AELPEVAVYL
AQQLTAAGFT VKQVVREYAQ IESDALAGKF DAFILSRATV LDSGDPVAYL YSDFACEGSF
NIAQLCRPEI DQALQKAAAI PAGVARRQAI MQAENLILAS DAAIPMLHER VIQGESAQVK
DALRDPRERT LINSTTHIAT DAK
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