| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1406 |
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| Symbol | |
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| ID | 8132345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1641646 |
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| End bp | 1642986 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864696 |
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| Product | anaerobic C4-dicarboxylate transporter |
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| Protein accession | YP_003016988 |
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| Protein GI | 253687798 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases
[TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTCA TCATTCAATT AGTCATTGTC CTGATCTGCC TTTTTTACGG GGCAAGAAAA
GGCGGAATCG CGCTGGGTTT ATTAGGCGGG ATTGGACTTG TTATTCTGGT CTTTATTTTT
AAACTGCAAC CGGGTAAACC TCCCGTCGAT GTCATGCTGG TCATTATTGC CGTGGTGGCC
GCATCGGCAA CGCTTCAGGC ATCAGGCGGG CTGGATGTCA TGCTGCAAAT CGCGGAACGT
ATGCTGCGGC GTAATCCGAA ATACGTTTCG ATTATTGCCC CCTTCGTCAC CTGTGTTCTG
ACGATCCTGT GTGGTACAGG TCACGTGGTG TATACCATCC TGCCGATTAT TTATGATGTT
GCCATCAAGA ATAATATCCG CCCTGAAAGG CCGATGGCTG CCAGTTCAAT CGGCGCACAA
ATGGGGATTA TCGCCAGCCC GGTTTCTGTT GCGGTTGTCT CGCTGGTTGC CATGCTGGCT
AACTTCACCT TCCAGGGTAA GCATCTGGGA TTCCTCGACC TGCTGTCTAT TACCATCCCT
TCGACCCTGC TGGGCATTCT GGCGATTGGG ATTTTCAGCT GGTTCCGCGG TAAAGATCTG
GATAAGGATG AGGATTTCCA GAAATTCATC GCCGACCCAG AAAACAAACA GTACGTGTAT
GGCGATACCG CTACGCTGTT AGATAGAAAA TTGCCACGCA GCAACTGGAT CGCTATGTGG
ATTTTTCTGG CAACCATCGC CGCAGTAGCA ATTTTGGGTG CCGTTGAACA ACTGCGTCCG
GTCTTTGCCG GTAAACCACT GTCGATGGTA CTGGTCATTC AGATGTTTAT GCTGCTGTCT
GGTGCCATCA TCATTATTGC GACCAAAACC AATCCGTCAT CCATCTCGAA AAATGAAGTG
TTCCGTTCAG GGATGATTGC CATCGTCGCG GTATACGGTA TCGCCTGGAT GGCGGAAACC
ATGTTCGGCG CACATCTGGA AGAGATCAAA GGCACGCTCG GTTCATTGGT GAAAGTCTAT
CCCTGGGCTT ACGCTATTAT CCTGCTGATT GTATCGAAGT TTGTTAACTC GCAGGCAGCG
GCGCTGGCAG CTATTGTTCC TGTTGCGCTG GCTATCGGCG TGGATCCCGC ATATATCGTG
GCCTCTGCGC CAGCCTGCTA TGGTTACTAC ATTCTGCCAA CCTACCCAAG CGATCTGGCG
GCTATCCAGT TTGACCGCTC CGGCACCACC AAAATTGGCC GCTTCGTTAT TAACCACAGC
TTTATTCTGC CGGGACTCAT TGGCGTAACC ACCTCCTGTA TCTTTGGCTG GGTGTTTGCC
GCGATGTACG GCTTCCTGTA A
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| Protein sequence | MDFIIQLVIV LICLFYGARK GGIALGLLGG IGLVILVFIF KLQPGKPPVD VMLVIIAVVA
ASATLQASGG LDVMLQIAER MLRRNPKYVS IIAPFVTCVL TILCGTGHVV YTILPIIYDV
AIKNNIRPER PMAASSIGAQ MGIIASPVSV AVVSLVAMLA NFTFQGKHLG FLDLLSITIP
STLLGILAIG IFSWFRGKDL DKDEDFQKFI ADPENKQYVY GDTATLLDRK LPRSNWIAMW
IFLATIAAVA ILGAVEQLRP VFAGKPLSMV LVIQMFMLLS GAIIIIATKT NPSSISKNEV
FRSGMIAIVA VYGIAWMAET MFGAHLEEIK GTLGSLVKVY PWAYAIILLI VSKFVNSQAA
ALAAIVPVAL AIGVDPAYIV ASAPACYGYY ILPTYPSDLA AIQFDRSGTT KIGRFVINHS
FILPGLIGVT TSCIFGWVFA AMYGFL
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