| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1272 |
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| Symbol | |
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| ID | 8132209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1482034 |
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| End bp | 1482897 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864562 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003016856 |
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| Protein GI | 253687666 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTGTA TGACGTTATT GCGCCGTGCG TTCGCTATAC CGCTGTTATT AATGGTTTCA
TCCGGTTTGG CGCTTGCCGA GCGTCCAGCA GAAAACCAGA AGATAGCGTT GCAGATGTAT
ACGCTGCGTA GTGTGAATAC GCTTGATGAG CAATTTTCCA TGGCGCGCAA CGCCGGGTTT
AAGGCGGTTG AGCTTGTGGG AACGCACGGT ATTAGCGCGT CAGAAATGAA AGGGTTACTG
GGGAAATATC AGTTAAAAGC GATTGCTGCG CATGTCCAGT TTGGCGAACT GAAAAGCAAT
ATGGCTGAGG TTGTCGCCTT TAACAAGGCC ATCGGCAATC GCATGATTAT CGTGCCGTGG
CTCAATGTTG AAGATCGCCC GAATAGCGCA GGGGGATGGC AGCGCTTTGG TGCGGAAATG
AACGATCTTG GGCGTGAATT GAAGAAGCAG GGCATGCAAC TGGCTTATCA CAACCATAAT
TTTGAGATGA AGAAGTCTCG CGGCAAAACG GCGCTGGAAA TTATGTTAGA TGCCGCAGAG
CCAGAAAATC TGATGCTGGA AATGGATGTT GCCTGGGTAT CCCGCGGAGG GCAGGATCCG
GTGCGTCTTC TGCGCCACTA CAAAGGGCGT ATCTACTCGA TTCATGCGAA AGACAATACG
TCTATCGGCA TCCGCGATGA CGAAATGAAC TTTGCCCCAC CGGGCGAGGG TATTTTGGCG
TGGGAAGAGA TTATTCCGGC AGCGGCTAAA GCAGGCACGC ACTGGTTTGT TGCTGAACAT
GACTTGCCGA AAGATCCGCA GGCCATTATT TCCGCCGCTT ACCAGTCTCT GTATGAAAAA
CTGAGCAAGG TGAAAAGTAA GTAA
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| Protein sequence | MPCMTLLRRA FAIPLLLMVS SGLALAERPA ENQKIALQMY TLRSVNTLDE QFSMARNAGF
KAVELVGTHG ISASEMKGLL GKYQLKAIAA HVQFGELKSN MAEVVAFNKA IGNRMIIVPW
LNVEDRPNSA GGWQRFGAEM NDLGRELKKQ GMQLAYHNHN FEMKKSRGKT ALEIMLDAAE
PENLMLEMDV AWVSRGGQDP VRLLRHYKGR IYSIHAKDNT SIGIRDDEMN FAPPGEGILA
WEEIIPAAAK AGTHWFVAEH DLPKDPQAII SAAYQSLYEK LSKVKSK
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