Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1227 |
Symbol | |
ID | 8132162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1433794 |
End bp | 1434738 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644864515 |
Product | urea amidolyase related protein |
Protein accession | YP_003016811 |
Protein GI | 253687621 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1984] Allophanate hydrolase subunit 2 |
TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAAAG TTATCCATGC TGGATTGCAT ACTTCGGTGC AGGACGGTGG CCGTGTCGGT TTTCGCCGTT TGGGTATCAG CCAGTCAGGT GCGCTCGATC TGCCTGCTCT GACGATGGCT AACCTGCTGG TGGGCAACGC AGAGAATGCG GCCGCGCTGG AAATTACGCT GGGCAAGTTT ACCGCAACAT TCACTACCGC CTGCTGGGTG GCGCTGACTG GGGCAGACTG CCATGCCGAC CTTGATGGCA AACCGCTCTG GACAGGCTGG CGTTTCGCCG TGAAGCCGGG ACAAACGTTA AAAATGCGCA TGCCGCGTAA CGGAATGCGC AGCTATCTGG CCCTGTCCGG TGGCATAGAT GTGCCGGAAG CACTCGGTTC GCGCAGTACC GATTTGAAAG CGAGTTTTGG TGGTTTTGAC GGACGTTTGC TGATGGACGA CGATGAGCTT CCGCTGGGTA CGCCGACTCG TGAACTGACG CGGGAAGTCG GCATTAAGCA GCTGTTGTTC AGCAACCGCG TGCGGGCATT GCCGGGGCCG GAGTATCAGG AGTTCAGCGA AGAGATGCGG GAGCTGTTCT GGCGAACCTC CTGGCAGTTG AGCCCGCAAA GTAACCGCAT GGGCTACCGT TTGCTCGGTG CTGAGCTACA GCGTTCTGCC TTGTCAGGCA ACAAACCGCG CGAACTGCCA TCGCATGGAC TGCTACCGGG CGTCGTGCAG GTTCCACACA ATGGTCACCC TATCGTACTG CTGGCGGATG CGCAGACAAC CGGCGGTTAC CCGCGTATTG CGACGGTGAT CGAAGCGGAT TTATTCCATC TGGCGCAAAT CCGACTCGGT GAACCGATCC ATTTTATTCA CTGTACGCAG GCACAAGCGC AAAAAGCGGG CGAGGAACAG CGACGTTACC TCGAACAACT TGCATGGAGG CTACATGATT ATTGA
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Protein sequence | MLKVIHAGLH TSVQDGGRVG FRRLGISQSG ALDLPALTMA NLLVGNAENA AALEITLGKF TATFTTACWV ALTGADCHAD LDGKPLWTGW RFAVKPGQTL KMRMPRNGMR SYLALSGGID VPEALGSRST DLKASFGGFD GRLLMDDDEL PLGTPTRELT REVGIKQLLF SNRVRALPGP EYQEFSEEMR ELFWRTSWQL SPQSNRMGYR LLGAELQRSA LSGNKPRELP SHGLLPGVVQ VPHNGHPIVL LADAQTTGGY PRIATVIEAD LFHLAQIRLG EPIHFIHCTQ AQAQKAGEEQ RRYLEQLAWR LHDY
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