| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1144 |
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| Symbol | |
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| ID | 8132073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1337281 |
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| End bp | 1338546 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864426 |
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| Product | thioredoxin |
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| Protein accession | YP_003016728 |
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| Protein GI | 253687538 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACA CCATTATCAC CGCCAGCGAC ACCTCGCTGG ATGCGTTGCT CACGACTAGC
GACAAGCCCA TTCTGCTCGA CCTGTGGGCG CCCTGGTGCC AGCCGTGTAA AACGCTGGCT
CCTCTGCTGA ACACGATTGC CGACAACACG CCAGATAACC TGACCGTCGC CAAGCTGGAT
GTTGAGCAGT ATCCGGCGTT CATGCAGCGT TTTGGGGTAC GCGGCATTCC TACGCTGCTG
CTATTTAAAA ACGGACAGGA AATATCCCGA CAGATCGGTG TGAAAACGCT GGCGCAGCTA
CGTGGCTGGC TGGAGTCGCA CCAGATTGCG ATACAGAATA CCGTCCAGCC GCTGGCAGAC
AGCCGCGTAA CGTGGGGCTC GTTCTATGGT GATGCTTCTC TGCACGCTTT TCTCCACCAG
CGACTGCGCC AGCATGCGGC AGACGACGAT ATTAAACACG CGTTCGCTCC CTACTGGCAG
GACAACAAAG GCTCGGTTTC TGCCGTACTG GCGCACAATG CAGACATTCG CATCTTCGAG
CGGGTTACCG GGTTGCCTGC CGCACTCGGG CTGCTGCTGG AAAAACTGCC GAGCACCACG
CCAGAACAAG TTGACGCACT CTTCACCGCG CTCACGCCGG GAAAAGCCGT AGACGGCGTC
GCGCTGCAAT GGCTGCACCA CTGGTTAAGT CACGAAGAAA ATCCGTGGTC TGACTGGCTG
GCAGATAAAA CCGTCGACAA CCTGCGCCAG CAGTGGACTC ATGCGATTTC GCGGCTGTTA
GCGAGTGAAG TGGTAGCGGA AAGCGAATGG ACGGCACTGC ATCAGCAGGC GATCAGTTGG
GAAGAGAAAG CCTCCGATGA ACTCGGTCTG GAAAAAAATA TTGCGACAAT ACTCGCCAGC
CTATCGCCGC CGCCTGCTGC GTCTGATGCC GATAGCTGGC GGAGCATCAG TATCACGCTC
GGCTTCGCAC TGGCGCAGAC CCTGCAAATT AAAGACGGCT GGAGCAGAGA AGAACGCGCA
ACACCGGATA AGCGCTTCCG CTGGTTTCAG GCACAGGAAG ACGCCACGCC GAGCAAAAAG
CTAACGGACG AGCAAATTAC CGCGCTACGT GAACAATGGC TTCAGGAGAA CCCGGTTTTT
TCTGCGAAAG AGGATGCTTT TTATCAGCGC TATCCACAGC TGTTAGAAGC GCAGAAAGTC
CCCTTACAGG AAACGCTGTG GGCATTATTG CACCGTGCGC CCCCCTTCAA ATCACAGCTG
GACTGA
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| Protein sequence | MSDTIITASD TSLDALLTTS DKPILLDLWA PWCQPCKTLA PLLNTIADNT PDNLTVAKLD
VEQYPAFMQR FGVRGIPTLL LFKNGQEISR QIGVKTLAQL RGWLESHQIA IQNTVQPLAD
SRVTWGSFYG DASLHAFLHQ RLRQHAADDD IKHAFAPYWQ DNKGSVSAVL AHNADIRIFE
RVTGLPAALG LLLEKLPSTT PEQVDALFTA LTPGKAVDGV ALQWLHHWLS HEENPWSDWL
ADKTVDNLRQ QWTHAISRLL ASEVVAESEW TALHQQAISW EEKASDELGL EKNIATILAS
LSPPPAASDA DSWRSISITL GFALAQTLQI KDGWSREERA TPDKRFRWFQ AQEDATPSKK
LTDEQITALR EQWLQENPVF SAKEDAFYQR YPQLLEAQKV PLQETLWALL HRAPPFKSQL
D
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