| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1014 |
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| Symbol | |
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| ID | 8131943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1186599 |
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| End bp | 1187873 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864297 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003016599 |
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| Protein GI | 253687409 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAA ATCTCGCGCT GTGGCTGAGA GAAGCCGGAA TACAACACGC TAGCATCATT
GCGTTACTGA TTGTTCTTGG GCTGATATTG CTCATTTCTG CCATCATTCA TCTGATTTTG
CATCAGGTTG TGCTGAAAAG AATGGTGCTG CGTTCACTCA ATAAGCCAGG GAAAACCGAG
GGGCATGGGT GGAAACAGGC GCTAACGCAA CACAATCTGT TTAATCGGCT GGCCTTCCTG
CTACAAGGGG TGATCCTCAA TATTCAGGTC TTCGTATGGC TGCCTTCGCA AAGTGAAACC
CGTGAAGCGC TCATCATCTG CTCCCAAGTG TGGATCATGA TTTTTGCGCT GCTGTCCCTG
TTTTCGCTAC TCGATGTTTT GCTCAACGTC TCCGCACGAA CCAAAGTCGC TGCACAACTG
CCGCTGCGCG GCATCTTTCA GAGTCTGAAG CTGATTGCCA CCATCGTTAT CAGCATCATG
GTGGTGTCAT TACTTATCGG GAAATCCCCG CTGATTCTGA TTAGCGGTTT AGGCGCAATG
GCCGCCGTAC TGATGTTGGT GTTCAAAGAT CCGATTATGG GATTGGTCGC GGGCATCCAA
CTCTCCGCCA ACGATATGCT AACGCTGGGA GACTGGCTCG AAATGCCAAA ATACGGTGCT
GATGGCGCTG TTATCGACAT CGGGCTTACA ACGGTAAAAG TGAAAAACTG GGACAATACC
GTTACCACCA TCCCCACCTA CTCGCTGGTG TCCGACTCTT TCAAAAACTG GCGTTCGATG
TCGGAGTCAG GGGGACGGCG AATCAAGCGT AGCATCAATA TCGATACCAC CAGCGTGCAT
TTCATGACGG AAGACGAACA GGCACGCTTG CTGCGTAGCA AATTATTGTC GCCTTATATT
CAGAACAAGA AGAGCGAACT GGAGCAGCAC AACGCACAGT CCGAGTCCGA TCTGACCTCA
CCGCTGAATG GCCGCCGCCT GACGAATTTA GGCACGTTCC GCGCCTACCT TCAGGTTTAT
CTACGCACTC ATCCGGGGAT TCACAAGGGG ATGACGCTGA TGGTACGGCA GCTCGCGCCA
ACGTCAGAAG GGGTGCCACT GGAAATTTAT GCGTTTACCA ACACAACCGC CTGGGTCGAT
TATGAAAGCA TTCAGTCCGA TATTTTCGAC CATATCTTTG CGATCTTACC GGAGTTCGAT
CTCCGCGTTC ACCAGACGCC AACCGGTCAC GATATGCGGG TCATGGCACA GCAAATAACT
ACGCCGAAAG CGTAA
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| Protein sequence | MQQNLALWLR EAGIQHASII ALLIVLGLIL LISAIIHLIL HQVVLKRMVL RSLNKPGKTE
GHGWKQALTQ HNLFNRLAFL LQGVILNIQV FVWLPSQSET REALIICSQV WIMIFALLSL
FSLLDVLLNV SARTKVAAQL PLRGIFQSLK LIATIVISIM VVSLLIGKSP LILISGLGAM
AAVLMLVFKD PIMGLVAGIQ LSANDMLTLG DWLEMPKYGA DGAVIDIGLT TVKVKNWDNT
VTTIPTYSLV SDSFKNWRSM SESGGRRIKR SINIDTTSVH FMTEDEQARL LRSKLLSPYI
QNKKSELEQH NAQSESDLTS PLNGRRLTNL GTFRAYLQVY LRTHPGIHKG MTLMVRQLAP
TSEGVPLEIY AFTNTTAWVD YESIQSDIFD HIFAILPEFD LRVHQTPTGH DMRVMAQQIT
TPKA
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