| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1003 |
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| Symbol | |
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| ID | 8131932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1169443 |
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| End bp | 1171233 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864286 |
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| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
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| Protein accession | YP_003016588 |
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| Protein GI | 253687398 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAAA CGACACGCTC CCGCATTCTT GCGGCCTGTT CGACCATTGT TGTACTTTCA
CTGGTTATCA ATACTTTTCT AAATTACACC ATCGCCAATA ACGCGAATAA GGAATCGATC
CAAAATACGC TGGATGCGGT AGCAACCAGT CATAGTATAG CCATCAGCGA CTGGGTTGCT
TCTAAAACGC AGATGATTTC AGCTCTGCAC GATCGCGCCA TAAAGGATGA AGATCCGATC
CCGCTATTTA AACAGATCGT GGCTTCCGGC GGGTTCCTGA ACGTCTACAT GGGCTACGCC
AATGGCACGG CCAAGTTTGC CGATCCCGGT GGTATTCCTG CCGATTACAA CCCTACCATC
AGACCTTGGT ATCAGCAGGC TGTGAAAGAA GGTAAGCCGT TAGCGACCGC GCCGTACGTG
GATATGGTAA CGAATACGCT GGTAGTGTCT TTCGTTGCGC CTGTAGTGGA AGGGGGAACC
GTCAGAGGCG TCGTCGGTAG CGACGTCACC ATGAAGAGCG TGATCGAAAA CGTCAAAGCG
ATCAACCCGA GTCCGGGGAG TTTCGGCGTG CTGATTGACC GTAATGGTAC GATTATTGCG
CACCCAGATG AAAAGCTGAC GCTGAAAAAT ATCACCGAGA TTGCTCCTGC GATTAACCTG
AACGACATTC TTTCTGCGGA TAGCGCCCGC GATGTGGATT TTTCCGGCTC GACAAAACTG
GTGTTGGCAA AACCGATTAC CGGCACGAGC TGGTTCATGC TGGTGGCGTT GGACAAAGCT
GAAGCGACGG CGGGTATGCG TTCTCTGCTG TCTACCTCGG TCATCACGCT GGTTGCCATC
GCGCTGTTGG GCACGTTGGT GATTGGTTTC ATTATCACAT CAACGCTCAA GCGCCTGCTG
CAAATCCGTG ATGCGATGGA TGATATCAGC AACGGTAATA ACGATCTGAC GCAGCGTCTG
CCGGACGAAG GTCATGATGA AGTCGCGCAA ATTGCCCGCT CGTTTAATAT CTTTGTCGAT
AAGATCAGTC AGGTCATGAT CCAGATTCGG GATATCAGCG CATCGCTTCA GGTAGCGGCG
GATGAAATCT CAGCGGGGAA CAACGATCTT TCTGCACGCA CCGAATCTGC GGCGTCGAGC
ATTCAGCAAA CGGCGGCCTC GCTGGAGGAA ATCTCTGCGG CGGTGACGCA GTCGGCAGGA
TCGGCGCAAC AGGTTAACGC TAAAGCGCTG CTGCTGTCGA AAGATGCGGG CACGGGCGGG
AAAGTGGTTT CCGATGTGAT TGTCACGATG GAAGAGATCG TGGTCGCGTC TGGGAAAATC
GGCGATATCA TCGGCGTGAT TGATGGCATT GCATTCCAGA CTAACATTCT GGCGCTTAAC
GCAGCGGTAG AAGCTGCGCG TGCGGGTGAA CAGGGCCGTG GCTTCGCCGT GGTTGCCGGT
GAGGTTCGCA GTCTGGCACA GCGCAGCGCG CAGGCCGCAA AAGAAATTAA AGAACTGATT
GAATCGACGG TTTCCAGCGT GACGTCTGGC TCTGTGCAGG TTCGTCAGGC CAGCGACACG
ATGAATGAAA TTGTCGGTGG CGTGTCTACG GTGAGCTCGG TGATGTCTGA AATTACGCAT
GCAGCGGATG AACAAATGCG CGGTATCAAC GAGATCAACA AGGCGGTCGC ACAGTTGGAT
TCGATGGTGC AACAAAACGC CGCGCTGGTG CAGGAATCTG CTGCTGCATC AGGTGCGTTG
CAATCACAGG CGGAAGAACT GAACGCCGTC GTCGGGGCAT TCCGGGTCTA A
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| Protein sequence | MLKTTRSRIL AACSTIVVLS LVINTFLNYT IANNANKESI QNTLDAVATS HSIAISDWVA
SKTQMISALH DRAIKDEDPI PLFKQIVASG GFLNVYMGYA NGTAKFADPG GIPADYNPTI
RPWYQQAVKE GKPLATAPYV DMVTNTLVVS FVAPVVEGGT VRGVVGSDVT MKSVIENVKA
INPSPGSFGV LIDRNGTIIA HPDEKLTLKN ITEIAPAINL NDILSADSAR DVDFSGSTKL
VLAKPITGTS WFMLVALDKA EATAGMRSLL STSVITLVAI ALLGTLVIGF IITSTLKRLL
QIRDAMDDIS NGNNDLTQRL PDEGHDEVAQ IARSFNIFVD KISQVMIQIR DISASLQVAA
DEISAGNNDL SARTESAASS IQQTAASLEE ISAAVTQSAG SAQQVNAKAL LLSKDAGTGG
KVVSDVIVTM EEIVVASGKI GDIIGVIDGI AFQTNILALN AAVEAARAGE QGRGFAVVAG
EVRSLAQRSA QAAKEIKELI ESTVSSVTSG SVQVRQASDT MNEIVGGVST VSSVMSEITH
AADEQMRGIN EINKAVAQLD SMVQQNAALV QESAAASGAL QSQAEELNAV VGAFRV
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