Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0995 |
Symbol | |
ID | 8131924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1160551 |
End bp | 1162197 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644864278 |
Product | multidrug transporter membrane component/ATP-binding component |
Protein accession | YP_003016580 |
Protein GI | 253687390 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.64415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTGC TCCGCATCGT TTACCAACAA TACCGTTGGC CCTTTCTTGC CGTTATCCTG TTAAGTTTGT TGAGTGCCGC ATTGGGCATC GGACTTATTG CCTTTATCAA CCTGCAATTG ATTGAAACGG TCAATCAATC GTTGAGTGTG TTGCCGCAAT TTTTGGGCTT GCTGCTGCTC CTGATGGGCG TGACGTTGGT GTCACAACTG GCGTTGACCA CGCTGGGGCA CCATTTCGTT TATCGTCTGC GTGGGCAATT TATCAAGCGT ATTCTGGACA CCAATATTGC GCGTATCGAG CAGATCGGCA GTGCGCAACT GCTTGCCAGC CTGTCCAGCG ATATCCGCAA TATCACGATT GCGTTTGTGC GTCTGCCGGA ACTGATTCAG GGCATCGTGC TCACCATCGG TTCTGCGGCT TATCTGGCCT GGCTCTCCCC GAAAATGCTG GTGGTGACGT CCGTTTGGAT TGCGATAACG CTCTGGGGCG GGTTTATGCT GGTTTCCCGC GTGTATAGCC ATCTTACTCA GGTGCGGGAA GCGGAGGATC GTCTCCAGAA AGATTACGAA ACCGTGATTA ACGGGCGTAA GGAACTGACG CTTAATCGTG AACGGGCGCA GAAGCTGTAT GAAGAGGTTT ATCAGGCCAA TGCGCAGGAT TACCGACAGA ACGTGATTCG TGCCGATACC TTTCACCTCA GTGCGGTGAA CTGGTCGAAT ATTATGATGC TGGGCGTGAT TGGCGCGGTC TTTTTCATGG CAAACAATCT TGGCTGGGCG GATACCAATG TTGCCGCGAC ATACTCATTG ACGCTGCTTT TTTTACGCAC GCCGATGCTA CAGGCCGTTG GCGCGCTACC GACGTTGCTG AGTGCGCAAG TCGCGTTCAA TAAGTTGAAA CGTTTCGATT TAGCGGATTA TCAGGAACCG TTTTCCGCTG CCATTGCCCC TGCGGATTGG CAGGCGCTGG AACTGCGTGA TGTGGTGTTT CGTTATGACG ATTCCGGGTT TGAAGTCGGG CCGATCAATC TGGTGATAAA GCGTGGCGAA CTGGTGTTTT TGATTGGCGG TAACGGAAGC GGAAAATCGA CGCTGGCGAT GCTGCTGACA GGGCTCTATA CCCCGGTTTC CGGCTCGTTG CTGCTGGATA ACCGTCCCGT CACGGCGGAA ACGCGAGCGG ATTACCAAAA GCTATTTTCT GCCATTTTTA CCGACTTCCA CCTGTTTGGG CAGATGATGG GCCCGCAGGG AACAGTACCG GATACGGCGC TGGTCGACAG CTGGCTGGAT CGTCTGAACA TGCGGCATAA GCTGACGCTG GAGCATCATC AGGTGATGAA TTTACAGCTT TCTCAGGGGC AGCGTAAGCG TGTTGCGCTG CTGCTGGCTG TTGCCGAACA GCGGGACATC CTGCTGCTGG ATGAATGGGC TGCCGATCAG GATCCGCAAT TCCGCCGCGT GTTCTATCTT GAGCTGTTAC CGCAACTACG CGCACTGGGG AAAACGATTG TGGCGATCAG CCATGACGAT CACTACTTTG AACATGCCGA TCGCCTGCTT GAAATGCATC AGGGGACGCT GTCTGAACTG ACAGGCGACG CGCGTGAACA GGCCTCGCAG GATGCGGTGG CGCAGATTAG CCGGTAA
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Protein sequence | MELLRIVYQQ YRWPFLAVIL LSLLSAALGI GLIAFINLQL IETVNQSLSV LPQFLGLLLL LMGVTLVSQL ALTTLGHHFV YRLRGQFIKR ILDTNIARIE QIGSAQLLAS LSSDIRNITI AFVRLPELIQ GIVLTIGSAA YLAWLSPKML VVTSVWIAIT LWGGFMLVSR VYSHLTQVRE AEDRLQKDYE TVINGRKELT LNRERAQKLY EEVYQANAQD YRQNVIRADT FHLSAVNWSN IMMLGVIGAV FFMANNLGWA DTNVAATYSL TLLFLRTPML QAVGALPTLL SAQVAFNKLK RFDLADYQEP FSAAIAPADW QALELRDVVF RYDDSGFEVG PINLVIKRGE LVFLIGGNGS GKSTLAMLLT GLYTPVSGSL LLDNRPVTAE TRADYQKLFS AIFTDFHLFG QMMGPQGTVP DTALVDSWLD RLNMRHKLTL EHHQVMNLQL SQGQRKRVAL LLAVAEQRDI LLLDEWAADQ DPQFRRVFYL ELLPQLRALG KTIVAISHDD HYFEHADRLL EMHQGTLSEL TGDAREQASQ DAVAQISR
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