Gene PC1_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0988 
Symbol 
ID8131917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1136790 
End bp1137845 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content48% 
IMG OID644864272 
ProductPectate lyase 
Protein accessionYP_003016574 
Protein GI253687384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGT ATTTAACACC GATATTTTTA TGTACTGCTG CTTTTTCTTT TCAGGCTCAA 
GCTGATGACA CCATGCTGAT GCTGCTGAAA AAAGATAATG CCACCTATTT AAGCTGGTCT 
ACCGATGCAG GCAACCTTGT TCGCCAGGAT GTGTATCGCA GCACCAGTAA TAATCAGGCG 
AGCAGCGAAA AAATTGCAGA GCTCAATTCC ACCGACAGAA CCTTTACCGA TTTAACCGCC 
AATCCAAAGT CGGATTATTG GTATTGGGTG GATACCGTTA GCGGCAATAA TAATGTACTG 
AAGTCCAACG CAGCACCGAC CAACCCAAGT CTGGAGCCAG CACCACTGCG CGCTGCTTCA 
CTTAAAGCAG CCAGTTCAGA ATGTAAAGCA GGTGCGGTAA TTAAAGATAA AACCGTCGAC 
TGCGGGGGAA TTACTCTGGG TCTGAGCTGT AAGGGCGACA GTGATAAGCA GCCTCCCGTT 
ATCACGCTGG AAAATGCCAC CATTAAAAAC CTGCGCATCT CCGAAAAAGG CGGTTCTGAC 
GGTATCCACT GTAAATCAGG CAACTGCCGT ATCGAAAACG TAATCTGGGA AGATATCTGT 
GAAGATGCAG CGACCAACAA CGGCAAAACC CTGACCATCG TTGGCGGTGT CGCACATAAC 
ACCACCAATG GCCCTGGCGG CAAGCCGGAC AAAGTACTGC AACAGAATGC CAAAAACAGC 
CACACTATCG TACAGGGCAA CTTCACTCTG ACGGGTCAAC ACGGCAAACT GTGGCGTTCT 
TGCGGTGACT GCACCAACAA CGGCGGTCCA CGCAACCTCA CCATTATTAG CGCAACCGTT 
AACGGCACCA TTGATAGCAT CGCGGGCGTA AACCGTAACT TTGGTGATGT CGCTGAAATC 
CGCGATCTGC GTATTAAAAA CTACAAAGAA GGCAAACCGC CTGTATGTGA AGAGTTTACC 
GGCGTAGAAA AAGGCAAAGG TAACTCTCCT AAACACGGTG AATTCTGGGA TACCAAGAAC 
TGCAAAGTCA GCCGTTCAAA CGTTAAAGCG CTGTAA
 
Protein sequence
MFKYLTPIFL CTAAFSFQAQ ADDTMLMLLK KDNATYLSWS TDAGNLVRQD VYRSTSNNQA 
SSEKIAELNS TDRTFTDLTA NPKSDYWYWV DTVSGNNNVL KSNAAPTNPS LEPAPLRAAS 
LKAASSECKA GAVIKDKTVD CGGITLGLSC KGDSDKQPPV ITLENATIKN LRISEKGGSD 
GIHCKSGNCR IENVIWEDIC EDAATNNGKT LTIVGGVAHN TTNGPGGKPD KVLQQNAKNS 
HTIVQGNFTL TGQHGKLWRS CGDCTNNGGP RNLTIISATV NGTIDSIAGV NRNFGDVAEI 
RDLRIKNYKE GKPPVCEEFT GVEKGKGNSP KHGEFWDTKN CKVSRSNVKA L