Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0860 |
Symbol | |
ID | 8131785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1000254 |
End bp | 1000970 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644864141 |
Product | hypothetical protein |
Protein accession | YP_003016447 |
Protein GI | 253687257 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGTTA TGCAGATAGG CGCGTTACGT TTGCAGGTTA ATCGTAAAGC GATTAAGAAC CTGCATATCA GCGTCCTGCC GCCCGATGGA AAAGTCCGCG TTTCAGCCCC GGAACACATG ACGGAAACAG CGATTCGGAT GGCTGTCGCC TCGCGTTTTC GCTGGATCAG AAAGCAGCAG CAGGATTTCG CCAGACAACC TCGCCAGTCC GAGCGGGAGA TGGCCAGCGG AGAATGCCAC TATCTTTGGG GCCGCAAATA TCGCCTGTTT GTGATTGAGC GTCAGGGACG TCATGAAGTG AAGATCGCGG GGAATAATAA ACTCCAGCTT TATGTCCAGC CGGGAACCAG CAATGACAAT AAAATGCTGG TATTAAACGA GTTTTATCGA CATGAACTGA AACAGCAGGT TGCCAAATTA CTGCCCGACT GGCAGGCAAG AACTGGCGTT CTCCCAACGT TTTGGGGCAT CAAAAAAATG AAAACCTTTT GGGGCACCTG TAATACCACA ACAAAACGGA TCTGGCTCAA TCTGGAACTG GTCAAGAAGC CGCCGGAATG TCTGGAGTAT ATTCTGGTGC ATGAACTGGT TCACCTTCTG GAACGTCATC ATAACGAGCG TTTTCGTCTG CATATGGACC GGTTTATCCC TAACTGGCGT GAGCGGCGGG ACTTGCTAAA TATGATGCCG CTGGCGTTTG AAGCATGGGA ATATTGA
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Protein sequence | MPVMQIGALR LQVNRKAIKN LHISVLPPDG KVRVSAPEHM TETAIRMAVA SRFRWIRKQQ QDFARQPRQS EREMASGECH YLWGRKYRLF VIERQGRHEV KIAGNNKLQL YVQPGTSNDN KMLVLNEFYR HELKQQVAKL LPDWQARTGV LPTFWGIKKM KTFWGTCNTT TKRIWLNLEL VKKPPECLEY ILVHELVHLL ERHHNERFRL HMDRFIPNWR ERRDLLNMMP LAFEAWEY
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